RNA–Protein interactions for RNA: ENST00000538258.1

PGA3-204, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2 BASIC

Gene PGA3, Length 867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-204ENST00000538258 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
PGA3-204ENST00000538258 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
PGA3-204ENST00000538258 ABCC9O60706 1549 aa19■□□□□ 0.63
PGA3-204ENST00000538258 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
PGA3-204ENST00000538258 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
PGA3-204ENST00000538258 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PGA3-204ENST00000538258 NACADO15069 1562 aa18.29■□□□□ 0.52
PGA3-204ENST00000538258 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
PGA3-204ENST00000538258 MYO15BQ96JP2 1530 aa18.17■□□□□ 0.5
PGA3-204ENST00000538258 DCAF1Q9Y4B6 1507 aa18.11■□□□□ 0.49
PGA3-204ENST00000538258 UNC13AQ9UPW8 1703 aa17.91■□□□□ 0.46
PGA3-204ENST00000538258 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
PGA3-204ENST00000538258 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
PGA3-204ENST00000538258 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
PGA3-204ENST00000538258 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
PGA3-204ENST00000538258 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
PGA3-204ENST00000538258 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
PGA3-204ENST00000538258 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
PGA3-204ENST00000538258 CECR2Q9BXF3 1484 aa17.08■□□□□ 0.32
PGA3-204ENST00000538258 SMARCA4P51532 1647 aa17■□□□□ 0.31
PGA3-204ENST00000538258 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
PGA3-204ENST00000538258 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
PGA3-204ENST00000538258 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
PGA3-204ENST00000538258 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
PGA3-204ENST00000538258 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
PGA3-204ENST00000538258 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
PGA3-204ENST00000538258 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
PGA3-204ENST00000538258 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
PGA3-204ENST00000538258 WIZO95785 1651 aa16.72■□□□□ 0.27
PGA3-204ENST00000538258 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
PGA3-204ENST00000538258 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
PGA3-204ENST00000538258 CUX2O14529 1486 aa16.49■□□□□ 0.23
PGA3-204ENST00000538258 NESP48681 1621 aa16.46■□□□□ 0.23
PGA3-204ENST00000538258 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
PGA3-204ENST00000538258 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
PGA3-204ENST00000538258 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
PGA3-204ENST00000538258 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
PGA3-204ENST00000538258 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
PGA3-204ENST00000538258 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
PGA3-204ENST00000538258 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
PGA3-204ENST00000538258 CFTRP13569 1480 aa16.29■□□□□ 0.2
PGA3-204ENST00000538258 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
PGA3-204ENST00000538258 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
PGA3-204ENST00000538258 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
PGA3-204ENST00000538258 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
PGA3-204ENST00000538258 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
PGA3-204ENST00000538258 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
PGA3-204ENST00000538258 WDR62O43379 1518 aa16.08■□□□□ 0.16
PGA3-204ENST00000538258 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
PGA3-204ENST00000538258 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
PGA3-204ENST00000538258 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
PGA3-204ENST00000538258 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
PGA3-204ENST00000538258 CUX1P39880 1505 aa15.84■□□□□ 0.13
PGA3-204ENST00000538258 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
PGA3-204ENST00000538258 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
PGA3-204ENST00000538258 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
PGA3-204ENST00000538258 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
PGA3-204ENST00000538258 SOGA1O94964 1423 aa15.76■□□□□ 0.11
PGA3-204ENST00000538258 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
PGA3-204ENST00000538258 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
PGA3-204ENST00000538258 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
PGA3-204ENST00000538258 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
PGA3-204ENST00000538258 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
PGA3-204ENST00000538258 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
PGA3-204ENST00000538258 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
PGA3-204ENST00000538258 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
PGA3-204ENST00000538258 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.1
PGA3-204ENST00000538258 TDRD9Q8NDG6 1382 aaKnown RBP15.66■□□□□ 0.1
PGA3-204ENST00000538258 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
PGA3-204ENST00000538258 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
PGA3-204ENST00000538258 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
PGA3-204ENST00000538258 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
PGA3-204ENST00000538258 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
PGA3-204ENST00000538258 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
PGA3-204ENST00000538258 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
PGA3-204ENST00000538258 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
PGA3-204ENST00000538258 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
PGA3-204ENST00000538258 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
PGA3-204ENST00000538258 CHD1O14646 1710 aa15.52■□□□□ 0.08
PGA3-204ENST00000538258 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
PGA3-204ENST00000538258 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
PGA3-204ENST00000538258 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
PGA3-204ENST00000538258 FBLN2P98095 1184 aa15.5■□□□□ 0.07
PGA3-204ENST00000538258 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.07
PGA3-204ENST00000538258 SYNJ2O15056 1496 aa15.46■□□□□ 0.06
PGA3-204ENST00000538258 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
PGA3-204ENST00000538258 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
PGA3-204ENST00000538258 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
PGA3-204ENST00000538258 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
PGA3-204ENST00000538258 ARHGEF11O15085 1522 aa15.42■□□□□ 0.06
PGA3-204ENST00000538258 FHAD1B1AJZ9 1412 aa15.39■□□□□ 0.05
PGA3-204ENST00000538258 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
PGA3-204ENST00000538258 IGF1RP08069 1367 aa15.35■□□□□ 0.05
PGA3-204ENST00000538258 CUL7Q14999 1698 aa15.33■□□□□ 0.04
PGA3-204ENST00000538258 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
PGA3-204ENST00000538258 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
PGA3-204ENST00000538258 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
PGA3-204ENST00000538258 NUP160Q12769 1436 aa15.27■□□□□ 0.04
PGA3-204ENST00000538258 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
PGA3-204ENST00000538258 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms