RNA–Protein interactions for RNA: ENST00000537951.1

NPIPB4-208, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5 BASIC

Gene NPIPB4, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-208ENST00000537951 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
NPIPB4-208ENST00000537951 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
NPIPB4-208ENST00000537951 ABCC9O60706 1549 aa21.74■■□□□ 1.07
NPIPB4-208ENST00000537951 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
NPIPB4-208ENST00000537951 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
NPIPB4-208ENST00000537951 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
NPIPB4-208ENST00000537951 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
NPIPB4-208ENST00000537951 NACADO15069 1562 aa21.09■□□□□ 0.97
NPIPB4-208ENST00000537951 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
NPIPB4-208ENST00000537951 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
NPIPB4-208ENST00000537951 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
NPIPB4-208ENST00000537951 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
NPIPB4-208ENST00000537951 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
NPIPB4-208ENST00000537951 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
NPIPB4-208ENST00000537951 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
NPIPB4-208ENST00000537951 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
NPIPB4-208ENST00000537951 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
NPIPB4-208ENST00000537951 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
NPIPB4-208ENST00000537951 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
NPIPB4-208ENST00000537951 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
NPIPB4-208ENST00000537951 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
NPIPB4-208ENST00000537951 RSF1Q96T23 1441 aaPredicted RBP19.64■□□□□ 0.73
NPIPB4-208ENST00000537951 ATAD2BQ9ULI0 1458 aa19.58■□□□□ 0.73
NPIPB4-208ENST00000537951 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
NPIPB4-208ENST00000537951 NCAPD3P42695 1498 aa19.51■□□□□ 0.71
NPIPB4-208ENST00000537951 WIZO95785 1651 aa19.5■□□□□ 0.71
NPIPB4-208ENST00000537951 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
NPIPB4-208ENST00000537951 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
NPIPB4-208ENST00000537951 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
NPIPB4-208ENST00000537951 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
NPIPB4-208ENST00000537951 TOP2AP11388 1531 aaKnown RBP19.29■□□□□ 0.68
NPIPB4-208ENST00000537951 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
NPIPB4-208ENST00000537951 NESP48681 1621 aa18.96■□□□□ 0.63
NPIPB4-208ENST00000537951 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
NPIPB4-208ENST00000537951 CFTRP13569 1480 aa18.92■□□□□ 0.62
NPIPB4-208ENST00000537951 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
NPIPB4-208ENST00000537951 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
NPIPB4-208ENST00000537951 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
NPIPB4-208ENST00000537951 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
NPIPB4-208ENST00000537951 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
NPIPB4-208ENST00000537951 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
NPIPB4-208ENST00000537951 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
NPIPB4-208ENST00000537951 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
NPIPB4-208ENST00000537951 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
NPIPB4-208ENST00000537951 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
NPIPB4-208ENST00000537951 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
NPIPB4-208ENST00000537951 WDR62O43379 1518 aa18.5■□□□□ 0.55
NPIPB4-208ENST00000537951 CUX1P39880 1505 aa18.49■□□□□ 0.55
NPIPB4-208ENST00000537951 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
NPIPB4-208ENST00000537951 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
NPIPB4-208ENST00000537951 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
NPIPB4-208ENST00000537951 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
NPIPB4-208ENST00000537951 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
NPIPB4-208ENST00000537951 CUX2O14529 1486 aa18.37■□□□□ 0.53
NPIPB4-208ENST00000537951 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
NPIPB4-208ENST00000537951 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
NPIPB4-208ENST00000537951 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
NPIPB4-208ENST00000537951 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
NPIPB4-208ENST00000537951 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
NPIPB4-208ENST00000537951 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
NPIPB4-208ENST00000537951 SOGA1O94964 1423 aa18.24■□□□□ 0.51
NPIPB4-208ENST00000537951 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
NPIPB4-208ENST00000537951 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
NPIPB4-208ENST00000537951 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
NPIPB4-208ENST00000537951 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
NPIPB4-208ENST00000537951 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
NPIPB4-208ENST00000537951 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
NPIPB4-208ENST00000537951 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
NPIPB4-208ENST00000537951 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
NPIPB4-208ENST00000537951 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
NPIPB4-208ENST00000537951 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
NPIPB4-208ENST00000537951 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
NPIPB4-208ENST00000537951 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
NPIPB4-208ENST00000537951 IGF1RP08069 1367 aa17.99■□□□□ 0.47
NPIPB4-208ENST00000537951 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
NPIPB4-208ENST00000537951 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
NPIPB4-208ENST00000537951 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
NPIPB4-208ENST00000537951 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
NPIPB4-208ENST00000537951 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
NPIPB4-208ENST00000537951 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
NPIPB4-208ENST00000537951 EEA1Q15075 1411 aa17.86■□□□□ 0.45
NPIPB4-208ENST00000537951 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
NPIPB4-208ENST00000537951 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.44
NPIPB4-208ENST00000537951 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
NPIPB4-208ENST00000537951 SYNJ2O15056 1496 aa17.83■□□□□ 0.44
NPIPB4-208ENST00000537951 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
NPIPB4-208ENST00000537951 CARMIL1Q5VZK9 1371 aa17.82■□□□□ 0.44
NPIPB4-208ENST00000537951 CUL7Q14999 1698 aa17.78■□□□□ 0.44
NPIPB4-208ENST00000537951 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
NPIPB4-208ENST00000537951 CHD1O14646 1710 aa17.75■□□□□ 0.43
NPIPB4-208ENST00000537951 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
NPIPB4-208ENST00000537951 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
NPIPB4-208ENST00000537951 FBLN2P98095 1184 aa17.72■□□□□ 0.43
NPIPB4-208ENST00000537951 NUP160Q12769 1436 aa17.71■□□□□ 0.43
NPIPB4-208ENST00000537951 CEP170Q5SW79 1584 aa17.68■□□□□ 0.42
NPIPB4-208ENST00000537951 KIF21BO75037 1637 aa17.67■□□□□ 0.42
NPIPB4-208ENST00000537951 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
NPIPB4-208ENST00000537951 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
NPIPB4-208ENST00000537951 GOLGA3Q08378 1498 aa17.58■□□□□ 0.41
NPIPB4-208ENST00000537951 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms