RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
TCF4-206ENST00000537856 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
TCF4-206ENST00000537856 ABCC9O60706 1549 aa22.41■■□□□ 1.18
TCF4-206ENST00000537856 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
TCF4-206ENST00000537856 NACADO15069 1562 aa21.58■■□□□ 1.05
TCF4-206ENST00000537856 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
TCF4-206ENST00000537856 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
TCF4-206ENST00000537856 ZCCHC6Q5VYS8 1495 aaKnown RBP21.29■■□□□ 1
TCF4-206ENST00000537856 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
TCF4-206ENST00000537856 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
TCF4-206ENST00000537856 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
TCF4-206ENST00000537856 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
TCF4-206ENST00000537856 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
TCF4-206ENST00000537856 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
TCF4-206ENST00000537856 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
TCF4-206ENST00000537856 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
TCF4-206ENST00000537856 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
TCF4-206ENST00000537856 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
TCF4-206ENST00000537856 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
TCF4-206ENST00000537856 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
TCF4-206ENST00000537856 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
TCF4-206ENST00000537856 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
TCF4-206ENST00000537856 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.77
TCF4-206ENST00000537856 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
TCF4-206ENST00000537856 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
TCF4-206ENST00000537856 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
TCF4-206ENST00000537856 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
TCF4-206ENST00000537856 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
TCF4-206ENST00000537856 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
TCF4-206ENST00000537856 WIZO95785 1651 aa19.43■□□□□ 0.7
TCF4-206ENST00000537856 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.7
TCF4-206ENST00000537856 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
TCF4-206ENST00000537856 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
TCF4-206ENST00000537856 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
TCF4-206ENST00000537856 CUX2O14529 1486 aa19.3■□□□□ 0.68
TCF4-206ENST00000537856 NESP48681 1621 aa19.29■□□□□ 0.68
TCF4-206ENST00000537856 CFTRP13569 1480 aa19.14■□□□□ 0.65
TCF4-206ENST00000537856 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
TCF4-206ENST00000537856 KIF21AQ7Z4S6 1674 aa19.07■□□□□ 0.64
TCF4-206ENST00000537856 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
TCF4-206ENST00000537856 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
TCF4-206ENST00000537856 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
TCF4-206ENST00000537856 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
TCF4-206ENST00000537856 WDR62O43379 1518 aa18.96■□□□□ 0.63
TCF4-206ENST00000537856 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
TCF4-206ENST00000537856 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
TCF4-206ENST00000537856 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
TCF4-206ENST00000537856 DNAJC5Q9H3Z4 198 aa18.81■□□□□ 0.6
TCF4-206ENST00000537856 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
TCF4-206ENST00000537856 TOPBP1Q92547 1522 aa18.71■□□□□ 0.59
TCF4-206ENST00000537856 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
TCF4-206ENST00000537856 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
TCF4-206ENST00000537856 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
TCF4-206ENST00000537856 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
TCF4-206ENST00000537856 SOGA1O94964 1423 aa18.53■□□□□ 0.56
TCF4-206ENST00000537856 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
TCF4-206ENST00000537856 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
TCF4-206ENST00000537856 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
TCF4-206ENST00000537856 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
TCF4-206ENST00000537856 CUX1P39880 1505 aa18.47■□□□□ 0.55
TCF4-206ENST00000537856 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
TCF4-206ENST00000537856 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
TCF4-206ENST00000537856 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
TCF4-206ENST00000537856 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
TCF4-206ENST00000537856 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
TCF4-206ENST00000537856 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
TCF4-206ENST00000537856 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
TCF4-206ENST00000537856 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
TCF4-206ENST00000537856 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
TCF4-206ENST00000537856 FBLN2P98095 1184 aa18.32■□□□□ 0.52
TCF4-206ENST00000537856 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
TCF4-206ENST00000537856 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
TCF4-206ENST00000537856 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
TCF4-206ENST00000537856 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
TCF4-206ENST00000537856 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
TCF4-206ENST00000537856 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
TCF4-206ENST00000537856 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
TCF4-206ENST00000537856 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
TCF4-206ENST00000537856 CHD1O14646 1710 aa18.19■□□□□ 0.5
TCF4-206ENST00000537856 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
TCF4-206ENST00000537856 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
TCF4-206ENST00000537856 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
TCF4-206ENST00000537856 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
TCF4-206ENST00000537856 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
TCF4-206ENST00000537856 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
TCF4-206ENST00000537856 RIMBP3CA6NJZ7 1639 aa18.06■□□□□ 0.48
TCF4-206ENST00000537856 RIMBP3BA6NNM3 1639 aa18.06■□□□□ 0.48
TCF4-206ENST00000537856 RIMBP3Q9UFD9 1639 aa18.06■□□□□ 0.48
TCF4-206ENST00000537856 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
TCF4-206ENST00000537856 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
TCF4-206ENST00000537856 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
TCF4-206ENST00000537856 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
TCF4-206ENST00000537856 NUP160Q12769 1436 aa17.98■□□□□ 0.47
TCF4-206ENST00000537856 IGF1RP08069 1367 aa17.95■□□□□ 0.46
TCF4-206ENST00000537856 CUL7Q14999 1698 aa17.95■□□□□ 0.46
TCF4-206ENST00000537856 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
TCF4-206ENST00000537856 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
TCF4-206ENST00000537856 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
TCF4-206ENST00000537856 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
TCF4-206ENST00000537856 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms