RNA–Protein interactions for RNA: ENST00000537218.1

TCHP-204, Transcript of trichoplein keratin filament binding, humanhuman

TSL 2

Gene TCHP, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-204ENST00000537218 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
TCHP-204ENST00000537218 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
TCHP-204ENST00000537218 ABCC9O60706 1549 aa32.35■■■□□ 2.77
TCHP-204ENST00000537218 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
TCHP-204ENST00000537218 NACADO15069 1562 aa31.2■■■□□ 2.58
TCHP-204ENST00000537218 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
TCHP-204ENST00000537218 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
TCHP-204ENST00000537218 MYO15BQ96JP2 1530 aa31.08■■■□□ 2.57
TCHP-204ENST00000537218 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
TCHP-204ENST00000537218 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
TCHP-204ENST00000537218 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
TCHP-204ENST00000537218 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
TCHP-204ENST00000537218 PABPN1Q86U42 306 aaKnown RBP eCLIP30.24■■■□□ 2.43
TCHP-204ENST00000537218 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
TCHP-204ENST00000537218 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
TCHP-204ENST00000537218 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
TCHP-204ENST00000537218 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
TCHP-204ENST00000537218 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
TCHP-204ENST00000537218 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
TCHP-204ENST00000537218 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.24
TCHP-204ENST00000537218 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
TCHP-204ENST00000537218 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
TCHP-204ENST00000537218 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
TCHP-204ENST00000537218 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
TCHP-204ENST00000537218 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
TCHP-204ENST00000537218 HMGXB3Q12766 1538 aa28.68■■■□□ 2.18
TCHP-204ENST00000537218 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
TCHP-204ENST00000537218 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
TCHP-204ENST00000537218 WIZO95785 1651 aa28.54■■■□□ 2.16
TCHP-204ENST00000537218 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
TCHP-204ENST00000537218 NESP48681 1621 aa28.04■■■□□ 2.08
TCHP-204ENST00000537218 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
TCHP-204ENST00000537218 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
TCHP-204ENST00000537218 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
TCHP-204ENST00000537218 CCDC88BA6NC98 1476 aa27.93■■■□□ 2.06
TCHP-204ENST00000537218 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
TCHP-204ENST00000537218 CFTRP13569 1480 aa27.83■■■□□ 2.05
TCHP-204ENST00000537218 PDS5BQ9NTI5 1447 aa27.81■■■□□ 2.04
TCHP-204ENST00000537218 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
TCHP-204ENST00000537218 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
TCHP-204ENST00000537218 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
TCHP-204ENST00000537218 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
TCHP-204ENST00000537218 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
TCHP-204ENST00000537218 CUX2O14529 1486 aa27.53■■■□□ 2
TCHP-204ENST00000537218 MRC2Q9UBG0 1479 aa27.52■■■□□ 2
TCHP-204ENST00000537218 WDR62O43379 1518 aa27.43■■□□□ 1.98
TCHP-204ENST00000537218 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
TCHP-204ENST00000537218 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
TCHP-204ENST00000537218 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
TCHP-204ENST00000537218 DNMBPQ6XZF7 1577 aa27.19■■□□□ 1.94
TCHP-204ENST00000537218 CUX1P39880 1505 aa27.07■■□□□ 1.92
TCHP-204ENST00000537218 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
TCHP-204ENST00000537218 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
TCHP-204ENST00000537218 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
TCHP-204ENST00000537218 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
TCHP-204ENST00000537218 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
TCHP-204ENST00000537218 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
TCHP-204ENST00000537218 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
TCHP-204ENST00000537218 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
TCHP-204ENST00000537218 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
TCHP-204ENST00000537218 SOGA1O94964 1423 aa26.87■■□□□ 1.89
TCHP-204ENST00000537218 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
TCHP-204ENST00000537218 EIF4G3O43432 1585 aaKnown RBP26.77■■□□□ 1.88
TCHP-204ENST00000537218 AQRO60306 1485 aaKnown RBP eCLIP26.73■■□□□ 1.874e-6■■■■■ 31
TCHP-204ENST00000537218 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
TCHP-204ENST00000537218 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
TCHP-204ENST00000537218 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
TCHP-204ENST00000537218 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
TCHP-204ENST00000537218 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
TCHP-204ENST00000537218 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
TCHP-204ENST00000537218 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
TCHP-204ENST00000537218 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
TCHP-204ENST00000537218 MAGI1Q96QZ7 1491 aaPredicted RBP26.48■■□□□ 1.83
TCHP-204ENST00000537218 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
TCHP-204ENST00000537218 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
TCHP-204ENST00000537218 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
TCHP-204ENST00000537218 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
TCHP-204ENST00000537218 KIF27Q86VH2 1401 aa26.38■■□□□ 1.81
TCHP-204ENST00000537218 CHD1O14646 1710 aa26.36■■□□□ 1.81
TCHP-204ENST00000537218 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
TCHP-204ENST00000537218 FBLN2P98095 1184 aa26.35■■□□□ 1.81
TCHP-204ENST00000537218 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
TCHP-204ENST00000537218 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
TCHP-204ENST00000537218 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
TCHP-204ENST00000537218 IGF1RP08069 1367 aa26.25■■□□□ 1.79
TCHP-204ENST00000537218 GRIN2AQ12879 1464 aa26.22■■□□□ 1.79
TCHP-204ENST00000537218 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
TCHP-204ENST00000537218 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
TCHP-204ENST00000537218 CUL7Q14999 1698 aa26.16■■□□□ 1.78
TCHP-204ENST00000537218 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
TCHP-204ENST00000537218 NUP160Q12769 1436 aa26.11■■□□□ 1.77
TCHP-204ENST00000537218 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
TCHP-204ENST00000537218 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
TCHP-204ENST00000537218 ARHGEF11O15085 1522 aa25.99■■□□□ 1.75
TCHP-204ENST00000537218 EEA1Q15075 1411 aa25.98■■□□□ 1.75
TCHP-204ENST00000537218 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
TCHP-204ENST00000537218 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
TCHP-204ENST00000537218 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
TCHP-204ENST00000537218 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
TCHP-204ENST00000537218 PRXQ9BXM0 1461 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms