RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 NISCHQ9Y2I1 1504 aa46.22■■■■■ 4.99
COPS7A-205ENST00000536872 CCDC180Q9P1Z9 1646 aa40.91■■■■■ 4.14
COPS7A-205ENST00000536872 ABCC9O60706 1549 aa40.16■■■■■ 4.02
COPS7A-205ENST00000536872 DCAF8L2P0C7V8 631 aa38.94■■■■□ 3.82
COPS7A-205ENST00000536872 RB1CC1Q8TDY2 1594 aa38.54■■■■□ 3.76
COPS7A-205ENST00000536872 NACADO15069 1562 aa38.5■■■■□ 3.75
COPS7A-205ENST00000536872 ZCCHC6Q5VYS8 1495 aaKnown RBP38.48■■■■□ 3.75
COPS7A-205ENST00000536872 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
COPS7A-205ENST00000536872 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
COPS7A-205ENST00000536872 PABPN1Q86U42 306 aaKnown RBP eCLIP37.67■■■■□ 3.62
COPS7A-205ENST00000536872 UNC13AQ9UPW8 1703 aa37.64■■■■□ 3.62
COPS7A-205ENST00000536872 SCRIBQ14160 1630 aa37.53■■■■□ 3.6
COPS7A-205ENST00000536872 BICRAQ9NZM4 1560 aa37.37■■■■□ 3.57
COPS7A-205ENST00000536872 SHROOM4Q9ULL8 1493 aa36.85■■■■□ 3.49
COPS7A-205ENST00000536872 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
COPS7A-205ENST00000536872 EIF4G1Q04637 1599 aaKnown RBP36.39■■■■□ 3.42
COPS7A-205ENST00000536872 CC2D2AQ9P2K1 1620 aa36.23■■■■□ 3.39
COPS7A-205ENST00000536872 CECR2Q9BXF3 1484 aa36.08■■■■□ 3.37
COPS7A-205ENST00000536872 SMARCA4P51532 1647 aa35.82■■■■□ 3.32
COPS7A-205ENST00000536872 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
COPS7A-205ENST00000536872 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
COPS7A-205ENST00000536872 ATAD2BQ9ULI0 1458 aa35.63■■■■□ 3.29
COPS7A-205ENST00000536872 NCAPD3P42695 1498 aa35.56■■■■□ 3.28
COPS7A-205ENST00000536872 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
COPS7A-205ENST00000536872 BAZ1BQ9UIG0 1483 aaKnown RBP35.37■■■■□ 3.25
COPS7A-205ENST00000536872 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
COPS7A-205ENST00000536872 HMGXB3Q12766 1538 aa35.33■■■■□ 3.25
COPS7A-205ENST00000536872 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
COPS7A-205ENST00000536872 WIZO95785 1651 aa35.3■■■■□ 3.24
COPS7A-205ENST00000536872 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
COPS7A-205ENST00000536872 NESP48681 1621 aa34.78■■■■□ 3.16
COPS7A-205ENST00000536872 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
COPS7A-205ENST00000536872 ERCC6Q03468 1493 aa34.6■■■■□ 3.13
COPS7A-205ENST00000536872 CADPSQ9ULU8 1353 aa34.6■■■■□ 3.13
COPS7A-205ENST00000536872 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
COPS7A-205ENST00000536872 CCDC88BA6NC98 1476 aa34.54■■■■□ 3.12
COPS7A-205ENST00000536872 PDS5BQ9NTI5 1447 aa34.42■■■■□ 3.1
COPS7A-205ENST00000536872 CFTRP13569 1480 aa34.35■■■■□ 3.09
COPS7A-205ENST00000536872 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
COPS7A-205ENST00000536872 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.06
COPS7A-205ENST00000536872 CEP164Q9UPV0 1460 aa34.12■■■■□ 3.05
COPS7A-205ENST00000536872 THOC2Q8NI27 1593 aaKnown RBP34.07■■■■□ 3.05
COPS7A-205ENST00000536872 CUX2O14529 1486 aa34.06■■■■□ 3.04
COPS7A-205ENST00000536872 MRC2Q9UBG0 1479 aa34.04■■■■□ 3.04
COPS7A-205ENST00000536872 PRDM2Q13029 1718 aa34.01■■■■□ 3.03
COPS7A-205ENST00000536872 WDR62O43379 1518 aa33.85■■■■□ 3.01
COPS7A-205ENST00000536872 URB2Q14146 1524 aaKnown RBP33.84■■■■□ 3.01
COPS7A-205ENST00000536872 TOPBP1Q92547 1522 aa33.65■■■□□ 2.98
COPS7A-205ENST00000536872 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
COPS7A-205ENST00000536872 DNMBPQ6XZF7 1577 aa33.57■■■□□ 2.96
COPS7A-205ENST00000536872 CUX1P39880 1505 aa33.44■■■□□ 2.94
COPS7A-205ENST00000536872 IFT140Q96RY7 1462 aa33.39■■■□□ 2.94
COPS7A-205ENST00000536872 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
COPS7A-205ENST00000536872 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
COPS7A-205ENST00000536872 SOGA1O94964 1423 aa33.31■■■□□ 2.92
COPS7A-205ENST00000536872 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.92
COPS7A-205ENST00000536872 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
COPS7A-205ENST00000536872 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
COPS7A-205ENST00000536872 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
COPS7A-205ENST00000536872 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
COPS7A-205ENST00000536872 AQRO60306 1485 aaKnown RBP eCLIP33.17■■■□□ 2.9
COPS7A-205ENST00000536872 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
COPS7A-205ENST00000536872 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
COPS7A-205ENST00000536872 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
COPS7A-205ENST00000536872 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
COPS7A-205ENST00000536872 DNAJC5Q9H3Z4 198 aa33.01■■■□□ 2.87
COPS7A-205ENST00000536872 ABCA10Q8WWZ4 1543 aa32.96■■■□□ 2.87
COPS7A-205ENST00000536872 WDR97A6NE52 1622 aa32.91■■■□□ 2.86
COPS7A-205ENST00000536872 FBLN2P98095 1184 aa32.89■■■□□ 2.86
COPS7A-205ENST00000536872 GAPVD1Q14C86 1478 aa32.88■■■□□ 2.85
COPS7A-205ENST00000536872 OSCARQ8IYS5 282 aa32.85■■■□□ 2.85
COPS7A-205ENST00000536872 GRIN2BQ13224 1484 aa32.84■■■□□ 2.85
COPS7A-205ENST00000536872 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
COPS7A-205ENST00000536872 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
COPS7A-205ENST00000536872 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
COPS7A-205ENST00000536872 CHMP7Q8WUX9 453 aaPredicted RBP32.74■■■□□ 2.83
COPS7A-205ENST00000536872 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
COPS7A-205ENST00000536872 MAGI1Q96QZ7 1491 aaPredicted RBP32.69■■■□□ 2.82
COPS7A-205ENST00000536872 CHD1O14646 1710 aa32.66■■■□□ 2.82
COPS7A-205ENST00000536872 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
COPS7A-205ENST00000536872 SYNJ2O15056 1496 aa32.6■■■□□ 2.81
COPS7A-205ENST00000536872 ERICH3Q5RHP9 1530 aa32.54■■■□□ 2.8
COPS7A-205ENST00000536872 IGF1RP08069 1367 aa32.49■■■□□ 2.79
COPS7A-205ENST00000536872 FHAD1B1AJZ9 1412 aa32.49■■■□□ 2.79
COPS7A-205ENST00000536872 ADAMTS12P58397 1594 aa32.47■■■□□ 2.79
COPS7A-205ENST00000536872 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
COPS7A-205ENST00000536872 RUSC2Q8N2Y8 1516 aa32.41■■■□□ 2.78
COPS7A-205ENST00000536872 GRIN2AQ12879 1464 aa32.41■■■□□ 2.78
COPS7A-205ENST00000536872 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.76
COPS7A-205ENST00000536872 CLASP1Q7Z460 1538 aa32.26■■■□□ 2.75
COPS7A-205ENST00000536872 CUL7Q14999 1698 aa32.25■■■□□ 2.75
COPS7A-205ENST00000536872 CEP170Q5SW79 1584 aa32.23■■■□□ 2.75
COPS7A-205ENST00000536872 NUP160Q12769 1436 aa32.22■■■□□ 2.75
COPS7A-205ENST00000536872 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
COPS7A-205ENST00000536872 ARHGEF11O15085 1522 aa32.19■■■□□ 2.74
COPS7A-205ENST00000536872 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
COPS7A-205ENST00000536872 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
COPS7A-205ENST00000536872 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
COPS7A-205ENST00000536872 CSRNP3Q8WYN3 585 aa32.11■■■□□ 2.73
COPS7A-205ENST00000536872 CYB5RLQ6IPT4 315 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms