RNA–Protein interactions for RNA: ENST00000536610.5

CD4-207, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 608 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-207ENST00000536610 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
CD4-207ENST00000536610 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
CD4-207ENST00000536610 ABCC9O60706 1549 aa20.76■□□□□ 0.91
CD4-207ENST00000536610 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
CD4-207ENST00000536610 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
CD4-207ENST00000536610 NACADO15069 1562 aa19.76■□□□□ 0.75
CD4-207ENST00000536610 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
CD4-207ENST00000536610 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
CD4-207ENST00000536610 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
CD4-207ENST00000536610 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
CD4-207ENST00000536610 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.7
CD4-207ENST00000536610 SCRIBQ14160 1630 aa19.27■□□□□ 0.68
CD4-207ENST00000536610 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
CD4-207ENST00000536610 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
CD4-207ENST00000536610 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
CD4-207ENST00000536610 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
CD4-207ENST00000536610 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
CD4-207ENST00000536610 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
CD4-207ENST00000536610 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
CD4-207ENST00000536610 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
CD4-207ENST00000536610 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
CD4-207ENST00000536610 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
CD4-207ENST00000536610 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
CD4-207ENST00000536610 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
CD4-207ENST00000536610 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
CD4-207ENST00000536610 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
CD4-207ENST00000536610 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
CD4-207ENST00000536610 WIZO95785 1651 aa18.09■□□□□ 0.49
CD4-207ENST00000536610 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
CD4-207ENST00000536610 NESP48681 1621 aa17.94■□□□□ 0.46
CD4-207ENST00000536610 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
CD4-207ENST00000536610 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
CD4-207ENST00000536610 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
CD4-207ENST00000536610 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
CD4-207ENST00000536610 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
CD4-207ENST00000536610 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
CD4-207ENST00000536610 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
CD4-207ENST00000536610 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
CD4-207ENST00000536610 CFTRP13569 1480 aa17.61■□□□□ 0.41
CD4-207ENST00000536610 CUX2O14529 1486 aa17.59■□□□□ 0.41
CD4-207ENST00000536610 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
CD4-207ENST00000536610 THOC2Q8NI27 1593 aaKnown RBP17.56■□□□□ 0.4
CD4-207ENST00000536610 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
CD4-207ENST00000536610 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
CD4-207ENST00000536610 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
CD4-207ENST00000536610 WDR62O43379 1518 aa17.42■□□□□ 0.38
CD4-207ENST00000536610 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
CD4-207ENST00000536610 TOPBP1Q92547 1522 aa17.27■□□□□ 0.36
CD4-207ENST00000536610 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
CD4-207ENST00000536610 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
CD4-207ENST00000536610 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
CD4-207ENST00000536610 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
CD4-207ENST00000536610 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
CD4-207ENST00000536610 CUX1P39880 1505 aa17.13■□□□□ 0.33
CD4-207ENST00000536610 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
CD4-207ENST00000536610 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
CD4-207ENST00000536610 SOGA1O94964 1423 aa17.1■□□□□ 0.33
CD4-207ENST00000536610 FGD5Q6ZNL6 1462 aa17.09■□□□□ 0.33
CD4-207ENST00000536610 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
CD4-207ENST00000536610 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
CD4-207ENST00000536610 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
CD4-207ENST00000536610 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
CD4-207ENST00000536610 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
CD4-207ENST00000536610 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
CD4-207ENST00000536610 FBLN2P98095 1184 aa16.98■□□□□ 0.31
CD4-207ENST00000536610 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
CD4-207ENST00000536610 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
CD4-207ENST00000536610 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
CD4-207ENST00000536610 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
CD4-207ENST00000536610 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
CD4-207ENST00000536610 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
CD4-207ENST00000536610 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
CD4-207ENST00000536610 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
CD4-207ENST00000536610 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
CD4-207ENST00000536610 CHD1O14646 1710 aa16.84■□□□□ 0.29
CD4-207ENST00000536610 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
CD4-207ENST00000536610 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
CD4-207ENST00000536610 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
CD4-207ENST00000536610 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
CD4-207ENST00000536610 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
CD4-207ENST00000536610 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
CD4-207ENST00000536610 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
CD4-207ENST00000536610 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
CD4-207ENST00000536610 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
CD4-207ENST00000536610 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
CD4-207ENST00000536610 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
CD4-207ENST00000536610 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
CD4-207ENST00000536610 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
CD4-207ENST00000536610 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
CD4-207ENST00000536610 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
CD4-207ENST00000536610 IGF1RP08069 1367 aa16.63■□□□□ 0.25
CD4-207ENST00000536610 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
CD4-207ENST00000536610 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
CD4-207ENST00000536610 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
CD4-207ENST00000536610 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
CD4-207ENST00000536610 NUP160Q12769 1436 aa16.53■□□□□ 0.24
CD4-207ENST00000536610 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
CD4-207ENST00000536610 JPH4Q96JJ6 628 aa16.49■□□□□ 0.23
CD4-207ENST00000536610 CUL7Q14999 1698 aa16.48■□□□□ 0.23
CD4-207ENST00000536610 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms