RNA–Protein interactions for RNA: ENST00000536521.5

PTPN6-208, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 513 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-208ENST00000536521 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
PTPN6-208ENST00000536521 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
PTPN6-208ENST00000536521 ABCC9O60706 1549 aa22.75■■□□□ 1.23
PTPN6-208ENST00000536521 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
PTPN6-208ENST00000536521 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
PTPN6-208ENST00000536521 NACADO15069 1562 aa21.81■■□□□ 1.08
PTPN6-208ENST00000536521 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
PTPN6-208ENST00000536521 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
PTPN6-208ENST00000536521 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
PTPN6-208ENST00000536521 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
PTPN6-208ENST00000536521 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
PTPN6-208ENST00000536521 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
PTPN6-208ENST00000536521 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
PTPN6-208ENST00000536521 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
PTPN6-208ENST00000536521 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
PTPN6-208ENST00000536521 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
PTPN6-208ENST00000536521 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
PTPN6-208ENST00000536521 CECR2Q9BXF3 1484 aa20.46■□□□□ 0.87
PTPN6-208ENST00000536521 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
PTPN6-208ENST00000536521 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
PTPN6-208ENST00000536521 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
PTPN6-208ENST00000536521 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
PTPN6-208ENST00000536521 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
PTPN6-208ENST00000536521 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
PTPN6-208ENST00000536521 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
PTPN6-208ENST00000536521 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
PTPN6-208ENST00000536521 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
PTPN6-208ENST00000536521 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
PTPN6-208ENST00000536521 WIZO95785 1651 aa19.79■□□□□ 0.76
PTPN6-208ENST00000536521 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
PTPN6-208ENST00000536521 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
PTPN6-208ENST00000536521 NESP48681 1621 aa19.62■□□□□ 0.73
PTPN6-208ENST00000536521 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
PTPN6-208ENST00000536521 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
PTPN6-208ENST00000536521 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
PTPN6-208ENST00000536521 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
PTPN6-208ENST00000536521 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
PTPN6-208ENST00000536521 CFTRP13569 1480 aa19.43■□□□□ 0.7
PTPN6-208ENST00000536521 CUX2O14529 1486 aa19.41■□□□□ 0.7
PTPN6-208ENST00000536521 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
PTPN6-208ENST00000536521 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
PTPN6-208ENST00000536521 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
PTPN6-208ENST00000536521 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
PTPN6-208ENST00000536521 THOC2Q8NI27 1593 aaKnown RBP19.21■□□□□ 0.67
PTPN6-208ENST00000536521 WDR62O43379 1518 aa19.15■□□□□ 0.66
PTPN6-208ENST00000536521 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
PTPN6-208ENST00000536521 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
PTPN6-208ENST00000536521 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
PTPN6-208ENST00000536521 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
PTPN6-208ENST00000536521 TOPBP1Q92547 1522 aa19■□□□□ 0.63
PTPN6-208ENST00000536521 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
PTPN6-208ENST00000536521 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
PTPN6-208ENST00000536521 SOGA1O94964 1423 aa18.88■□□□□ 0.61
PTPN6-208ENST00000536521 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
PTPN6-208ENST00000536521 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
PTPN6-208ENST00000536521 CUX1P39880 1505 aa18.79■□□□□ 0.6
PTPN6-208ENST00000536521 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
PTPN6-208ENST00000536521 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
PTPN6-208ENST00000536521 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.6
PTPN6-208ENST00000536521 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
PTPN6-208ENST00000536521 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
PTPN6-208ENST00000536521 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.59
PTPN6-208ENST00000536521 FBLN2P98095 1184 aa18.72■□□□□ 0.59
PTPN6-208ENST00000536521 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
PTPN6-208ENST00000536521 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
PTPN6-208ENST00000536521 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
PTPN6-208ENST00000536521 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
PTPN6-208ENST00000536521 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
PTPN6-208ENST00000536521 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
PTPN6-208ENST00000536521 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
PTPN6-208ENST00000536521 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
PTPN6-208ENST00000536521 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
PTPN6-208ENST00000536521 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
PTPN6-208ENST00000536521 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
PTPN6-208ENST00000536521 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
PTPN6-208ENST00000536521 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
PTPN6-208ENST00000536521 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
PTPN6-208ENST00000536521 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
PTPN6-208ENST00000536521 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
PTPN6-208ENST00000536521 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
PTPN6-208ENST00000536521 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
PTPN6-208ENST00000536521 PBRM1Q86U86 1689 aa18.37■□□□□ 0.53
PTPN6-208ENST00000536521 CHD1O14646 1710 aa18.37■□□□□ 0.53
PTPN6-208ENST00000536521 IGF1RP08069 1367 aa18.36■□□□□ 0.53
PTPN6-208ENST00000536521 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
PTPN6-208ENST00000536521 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
PTPN6-208ENST00000536521 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
PTPN6-208ENST00000536521 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
PTPN6-208ENST00000536521 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
PTPN6-208ENST00000536521 JPH4Q96JJ6 628 aa18.24■□□□□ 0.51
PTPN6-208ENST00000536521 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
PTPN6-208ENST00000536521 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
PTPN6-208ENST00000536521 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
PTPN6-208ENST00000536521 NUP160Q12769 1436 aa18.22■□□□□ 0.51
PTPN6-208ENST00000536521 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
PTPN6-208ENST00000536521 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
PTPN6-208ENST00000536521 CUL7Q14999 1698 aa18.15■□□□□ 0.5
PTPN6-208ENST00000536521 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
PTPN6-208ENST00000536521 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
PTPN6-208ENST00000536521 CEP170Q5SW79 1584 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms