RNA–Protein interactions for RNA: ENST00000535936.1

PAAF1-206, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-206ENST00000535936 AEBP2Q6ZN18 517 aaPredicted RBP24.46■■□□□ 1.51
PAAF1-206ENST00000535936 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
PAAF1-206ENST00000535936 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
PAAF1-206ENST00000535936 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
PAAF1-206ENST00000535936 PHF23Q9BUL5 403 aaPredicted RBP20.59■□□□□ 0.89
PAAF1-206ENST00000535936 ABCC9O60706 1549 aa20.36■□□□□ 0.85
PAAF1-206ENST00000535936 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
PAAF1-206ENST00000535936 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
PAAF1-206ENST00000535936 FOXD1Q16676 465 aa19.37■□□□□ 0.69
PAAF1-206ENST00000535936 NACADO15069 1562 aa19.25■□□□□ 0.67
PAAF1-206ENST00000535936 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
PAAF1-206ENST00000535936 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
PAAF1-206ENST00000535936 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
PAAF1-206ENST00000535936 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
PAAF1-206ENST00000535936 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.6
PAAF1-206ENST00000535936 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
PAAF1-206ENST00000535936 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
PAAF1-206ENST00000535936 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
PAAF1-206ENST00000535936 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
PAAF1-206ENST00000535936 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
PAAF1-206ENST00000535936 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
PAAF1-206ENST00000535936 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
PAAF1-206ENST00000535936 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
PAAF1-206ENST00000535936 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
PAAF1-206ENST00000535936 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
PAAF1-206ENST00000535936 ADRA2BP18089 450 aa18.24■□□□□ 0.51
PAAF1-206ENST00000535936 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
PAAF1-206ENST00000535936 MSH5O43196 834 aa18.02■□□□□ 0.48
PAAF1-206ENST00000535936 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
PAAF1-206ENST00000535936 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
PAAF1-206ENST00000535936 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
PAAF1-206ENST00000535936 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
PAAF1-206ENST00000535936 CUX2O14529 1486 aa17.66■□□□□ 0.42
PAAF1-206ENST00000535936 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
PAAF1-206ENST00000535936 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
PAAF1-206ENST00000535936 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
PAAF1-206ENST00000535936 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
PAAF1-206ENST00000535936 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
PAAF1-206ENST00000535936 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
PAAF1-206ENST00000535936 NESP48681 1621 aa17.39■□□□□ 0.37
PAAF1-206ENST00000535936 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
PAAF1-206ENST00000535936 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
PAAF1-206ENST00000535936 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
PAAF1-206ENST00000535936 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
PAAF1-206ENST00000535936 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
PAAF1-206ENST00000535936 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
PAAF1-206ENST00000535936 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
PAAF1-206ENST00000535936 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
PAAF1-206ENST00000535936 WIZO95785 1651 aa17.08■□□□□ 0.32
PAAF1-206ENST00000535936 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
PAAF1-206ENST00000535936 WDR62O43379 1518 aa17.04■□□□□ 0.32
PAAF1-206ENST00000535936 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
PAAF1-206ENST00000535936 CFTRP13569 1480 aa16.98■□□□□ 0.31
PAAF1-206ENST00000535936 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
PAAF1-206ENST00000535936 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
PAAF1-206ENST00000535936 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
PAAF1-206ENST00000535936 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
PAAF1-206ENST00000535936 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
PAAF1-206ENST00000535936 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
PAAF1-206ENST00000535936 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
PAAF1-206ENST00000535936 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
PAAF1-206ENST00000535936 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
PAAF1-206ENST00000535936 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
PAAF1-206ENST00000535936 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
PAAF1-206ENST00000535936 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
PAAF1-206ENST00000535936 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
PAAF1-206ENST00000535936 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
PAAF1-206ENST00000535936 FBLN2P98095 1184 aa16.55■□□□□ 0.24
PAAF1-206ENST00000535936 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
PAAF1-206ENST00000535936 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
PAAF1-206ENST00000535936 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
PAAF1-206ENST00000535936 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
PAAF1-206ENST00000535936 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
PAAF1-206ENST00000535936 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
PAAF1-206ENST00000535936 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
PAAF1-206ENST00000535936 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
PAAF1-206ENST00000535936 SOGA1O94964 1423 aa16.47■□□□□ 0.23
PAAF1-206ENST00000535936 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
PAAF1-206ENST00000535936 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
PAAF1-206ENST00000535936 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
PAAF1-206ENST00000535936 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
PAAF1-206ENST00000535936 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
PAAF1-206ENST00000535936 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
PAAF1-206ENST00000535936 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
PAAF1-206ENST00000535936 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
PAAF1-206ENST00000535936 CHD1O14646 1710 aa16.38■□□□□ 0.21
PAAF1-206ENST00000535936 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
PAAF1-206ENST00000535936 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
PAAF1-206ENST00000535936 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
PAAF1-206ENST00000535936 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
PAAF1-206ENST00000535936 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
PAAF1-206ENST00000535936 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
PAAF1-206ENST00000535936 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
PAAF1-206ENST00000535936 CUX1P39880 1505 aa16.28■□□□□ 0.2
PAAF1-206ENST00000535936 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
PAAF1-206ENST00000535936 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
PAAF1-206ENST00000535936 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
PAAF1-206ENST00000535936 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.18
PAAF1-206ENST00000535936 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
PAAF1-206ENST00000535936 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms