RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
LRTOMT-211ENST00000535883 ABCC9O60706 1549 aa21.35■■□□□ 1.01
LRTOMT-211ENST00000535883 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
LRTOMT-211ENST00000535883 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
LRTOMT-211ENST00000535883 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
LRTOMT-211ENST00000535883 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
LRTOMT-211ENST00000535883 NACADO15069 1562 aa19.74■□□□□ 0.75
LRTOMT-211ENST00000535883 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
LRTOMT-211ENST00000535883 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
LRTOMT-211ENST00000535883 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
LRTOMT-211ENST00000535883 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
LRTOMT-211ENST00000535883 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
LRTOMT-211ENST00000535883 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
LRTOMT-211ENST00000535883 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
LRTOMT-211ENST00000535883 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
LRTOMT-211ENST00000535883 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
LRTOMT-211ENST00000535883 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
LRTOMT-211ENST00000535883 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
LRTOMT-211ENST00000535883 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
LRTOMT-211ENST00000535883 CUX2O14529 1486 aa18.49■□□□□ 0.55
LRTOMT-211ENST00000535883 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
LRTOMT-211ENST00000535883 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
LRTOMT-211ENST00000535883 NESP48681 1621 aa18.27■□□□□ 0.51
LRTOMT-211ENST00000535883 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
LRTOMT-211ENST00000535883 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
LRTOMT-211ENST00000535883 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
LRTOMT-211ENST00000535883 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
LRTOMT-211ENST00000535883 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
LRTOMT-211ENST00000535883 SMARCA2P51531 1590 aa18■□□□□ 0.47
LRTOMT-211ENST00000535883 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
LRTOMT-211ENST00000535883 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
LRTOMT-211ENST00000535883 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
LRTOMT-211ENST00000535883 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
LRTOMT-211ENST00000535883 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
LRTOMT-211ENST00000535883 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
LRTOMT-211ENST00000535883 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
LRTOMT-211ENST00000535883 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
LRTOMT-211ENST00000535883 MRC2Q9UBG0 1479 aa17.71■□□□□ 0.43
LRTOMT-211ENST00000535883 WDR62O43379 1518 aa17.7■□□□□ 0.42
LRTOMT-211ENST00000535883 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
LRTOMT-211ENST00000535883 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.4
LRTOMT-211ENST00000535883 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
LRTOMT-211ENST00000535883 WIZO95785 1651 aa17.5■□□□□ 0.39
LRTOMT-211ENST00000535883 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
LRTOMT-211ENST00000535883 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
LRTOMT-211ENST00000535883 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
LRTOMT-211ENST00000535883 RIMBP3Q9UFD9 1639 aa17.45■□□□□ 0.38
LRTOMT-211ENST00000535883 CFTRP13569 1480 aa17.44■□□□□ 0.38
LRTOMT-211ENST00000535883 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
LRTOMT-211ENST00000535883 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
LRTOMT-211ENST00000535883 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
LRTOMT-211ENST00000535883 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
LRTOMT-211ENST00000535883 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
LRTOMT-211ENST00000535883 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
LRTOMT-211ENST00000535883 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
LRTOMT-211ENST00000535883 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
LRTOMT-211ENST00000535883 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
LRTOMT-211ENST00000535883 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRTOMT-211ENST00000535883 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
LRTOMT-211ENST00000535883 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
LRTOMT-211ENST00000535883 CHD1O14646 1710 aa17.07■□□□□ 0.32
LRTOMT-211ENST00000535883 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
LRTOMT-211ENST00000535883 FBLN2P98095 1184 aa17.04■□□□□ 0.32
LRTOMT-211ENST00000535883 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
LRTOMT-211ENST00000535883 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
LRTOMT-211ENST00000535883 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
LRTOMT-211ENST00000535883 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
LRTOMT-211ENST00000535883 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
LRTOMT-211ENST00000535883 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
LRTOMT-211ENST00000535883 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
LRTOMT-211ENST00000535883 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
LRTOMT-211ENST00000535883 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
LRTOMT-211ENST00000535883 SOGA1O94964 1423 aa16.85■□□□□ 0.29
LRTOMT-211ENST00000535883 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
LRTOMT-211ENST00000535883 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
LRTOMT-211ENST00000535883 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
LRTOMT-211ENST00000535883 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
LRTOMT-211ENST00000535883 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
LRTOMT-211ENST00000535883 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
LRTOMT-211ENST00000535883 CUX1P39880 1505 aa16.71■□□□□ 0.27
LRTOMT-211ENST00000535883 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
LRTOMT-211ENST00000535883 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
LRTOMT-211ENST00000535883 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
LRTOMT-211ENST00000535883 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
LRTOMT-211ENST00000535883 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
LRTOMT-211ENST00000535883 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
LRTOMT-211ENST00000535883 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
LRTOMT-211ENST00000535883 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
LRTOMT-211ENST00000535883 NUP160Q12769 1436 aa16.52■□□□□ 0.23
LRTOMT-211ENST00000535883 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
LRTOMT-211ENST00000535883 KDM4FA0A1W2PPD8 638 aa16.5■□□□□ 0.23
LRTOMT-211ENST00000535883 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
LRTOMT-211ENST00000535883 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
LRTOMT-211ENST00000535883 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
LRTOMT-211ENST00000535883 FAM69CQ0P6D2 419 aa16.41■□□□□ 0.22
LRTOMT-211ENST00000535883 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
LRTOMT-211ENST00000535883 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
LRTOMT-211ENST00000535883 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
LRTOMT-211ENST00000535883 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
LRTOMT-211ENST00000535883 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms