RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 NISCHQ9Y2I1 1504 aa20.02■□□□□ 0.8
LINC00943-203ENST00000535544 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
LINC00943-203ENST00000535544 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
LINC00943-203ENST00000535544 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
LINC00943-203ENST00000535544 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
LINC00943-203ENST00000535544 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.23
LINC00943-203ENST00000535544 ABCC9O60706 1549 aa16.38■□□□□ 0.21
LINC00943-203ENST00000535544 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
LINC00943-203ENST00000535544 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
LINC00943-203ENST00000535544 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
LINC00943-203ENST00000535544 NACADO15069 1562 aa15.91■□□□□ 0.14
LINC00943-203ENST00000535544 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
LINC00943-203ENST00000535544 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
LINC00943-203ENST00000535544 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
LINC00943-203ENST00000535544 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
LINC00943-203ENST00000535544 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00943-203ENST00000535544 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
LINC00943-203ENST00000535544 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
LINC00943-203ENST00000535544 WIZO95785 1651 aa15.52■□□□□ 0.08
LINC00943-203ENST00000535544 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
LINC00943-203ENST00000535544 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
LINC00943-203ENST00000535544 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
LINC00943-203ENST00000535544 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
LINC00943-203ENST00000535544 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
LINC00943-203ENST00000535544 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
LINC00943-203ENST00000535544 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
LINC00943-203ENST00000535544 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
LINC00943-203ENST00000535544 TOP2AP11388 1531 aaKnown RBP15.15■□□□□ 0.02
LINC00943-203ENST00000535544 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
LINC00943-203ENST00000535544 ABCC8Q09428 1581 aa15.06■□□□□ 0
LINC00943-203ENST00000535544 ATAD2BQ9ULI0 1458 aa15.05■□□□□ 0
LINC00943-203ENST00000535544 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ -0
LINC00943-203ENST00000535544 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
LINC00943-203ENST00000535544 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
LINC00943-203ENST00000535544 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
LINC00943-203ENST00000535544 SOGA1O94964 1423 aa14.85□□□□□ -0.03
LINC00943-203ENST00000535544 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
LINC00943-203ENST00000535544 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
LINC00943-203ENST00000535544 PPARGC1BQ86YN6 1023 aaKnown RBP14.78□□□□□ -0.04
LINC00943-203ENST00000535544 WRNQ14191 1432 aaPredicted RBP eCLIP14.76□□□□□ -0.05
LINC00943-203ENST00000535544 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
LINC00943-203ENST00000535544 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
LINC00943-203ENST00000535544 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
LINC00943-203ENST00000535544 CC2D2AQ9P2K1 1620 aa14.69□□□□□ -0.06
LINC00943-203ENST00000535544 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
LINC00943-203ENST00000535544 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
LINC00943-203ENST00000535544 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
LINC00943-203ENST00000535544 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
LINC00943-203ENST00000535544 TRIM26Q12899 539 aaPredicted RBP14.58□□□□□ -0.08
LINC00943-203ENST00000535544 CFTRP13569 1480 aa14.57□□□□□ -0.08
LINC00943-203ENST00000535544 CUX1P39880 1505 aa14.54□□□□□ -0.08
LINC00943-203ENST00000535544 HRCP23327 699 aa14.52□□□□□ -0.09
LINC00943-203ENST00000535544 TOP2BQ02880 1626 aa14.52□□□□□ -0.09
LINC00943-203ENST00000535544 NESP48681 1621 aa14.51□□□□□ -0.09
LINC00943-203ENST00000535544 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
LINC00943-203ENST00000535544 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
LINC00943-203ENST00000535544 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
LINC00943-203ENST00000535544 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
LINC00943-203ENST00000535544 EEA1Q15075 1411 aa14.46□□□□□ -0.09
LINC00943-203ENST00000535544 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
LINC00943-203ENST00000535544 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
LINC00943-203ENST00000535544 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
LINC00943-203ENST00000535544 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
LINC00943-203ENST00000535544 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
LINC00943-203ENST00000535544 KIF21BO75037 1637 aa14.35□□□□□ -0.11
LINC00943-203ENST00000535544 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
LINC00943-203ENST00000535544 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
LINC00943-203ENST00000535544 CLIP1P30622 1438 aa14.31□□□□□ -0.12
LINC00943-203ENST00000535544 CUX2O14529 1486 aa14.31□□□□□ -0.12
LINC00943-203ENST00000535544 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
LINC00943-203ENST00000535544 PRXQ9BXM0 1461 aa14.3□□□□□ -0.12
LINC00943-203ENST00000535544 IGF1RP08069 1367 aa14.28□□□□□ -0.12
LINC00943-203ENST00000535544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
LINC00943-203ENST00000535544 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
LINC00943-203ENST00000535544 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
LINC00943-203ENST00000535544 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
LINC00943-203ENST00000535544 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
LINC00943-203ENST00000535544 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
LINC00943-203ENST00000535544 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
LINC00943-203ENST00000535544 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
LINC00943-203ENST00000535544 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
LINC00943-203ENST00000535544 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
LINC00943-203ENST00000535544 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
LINC00943-203ENST00000535544 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
LINC00943-203ENST00000535544 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
LINC00943-203ENST00000535544 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
LINC00943-203ENST00000535544 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
LINC00943-203ENST00000535544 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
LINC00943-203ENST00000535544 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
LINC00943-203ENST00000535544 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
LINC00943-203ENST00000535544 APLP2Q06481 763 aa14.09□□□□□ -0.15
LINC00943-203ENST00000535544 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
LINC00943-203ENST00000535544 AQRO60306 1485 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC00943-203ENST00000535544 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.16
LINC00943-203ENST00000535544 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
LINC00943-203ENST00000535544 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
LINC00943-203ENST00000535544 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
LINC00943-203ENST00000535544 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
LINC00943-203ENST00000535544 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
LINC00943-203ENST00000535544 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms