RNA–Protein interactions for RNA: ENST00000535510.1

PHC1-203, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-203ENST00000535510 NISCHQ9Y2I1 1504 aa19.04■□□□□ 0.64
PHC1-203ENST00000535510 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.3
PHC1-203ENST00000535510 ABCC9O60706 1549 aa16.69■□□□□ 0.26
PHC1-203ENST00000535510 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
PHC1-203ENST00000535510 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
PHC1-203ENST00000535510 NACADO15069 1562 aa16.03■□□□□ 0.16
PHC1-203ENST00000535510 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
PHC1-203ENST00000535510 ZCCHC6Q5VYS8 1495 aaKnown RBP15.82■□□□□ 0.12
PHC1-203ENST00000535510 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
PHC1-203ENST00000535510 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
PHC1-203ENST00000535510 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
PHC1-203ENST00000535510 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
PHC1-203ENST00000535510 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
PHC1-203ENST00000535510 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
PHC1-203ENST00000535510 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
PHC1-203ENST00000535510 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
PHC1-203ENST00000535510 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0
PHC1-203ENST00000535510 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
PHC1-203ENST00000535510 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
PHC1-203ENST00000535510 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
PHC1-203ENST00000535510 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
PHC1-203ENST00000535510 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
PHC1-203ENST00000535510 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
PHC1-203ENST00000535510 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
PHC1-203ENST00000535510 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
PHC1-203ENST00000535510 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
PHC1-203ENST00000535510 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
PHC1-203ENST00000535510 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
PHC1-203ENST00000535510 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.09
PHC1-203ENST00000535510 WIZO95785 1651 aa14.43□□□□□ -0.1
PHC1-203ENST00000535510 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
PHC1-203ENST00000535510 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
PHC1-203ENST00000535510 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
PHC1-203ENST00000535510 NESP48681 1621 aa14.37□□□□□ -0.11
PHC1-203ENST00000535510 CUX2O14529 1486 aa14.36□□□□□ -0.11
PHC1-203ENST00000535510 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
PHC1-203ENST00000535510 CFTRP13569 1480 aa14.23□□□□□ -0.13
PHC1-203ENST00000535510 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
PHC1-203ENST00000535510 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
PHC1-203ENST00000535510 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
PHC1-203ENST00000535510 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
PHC1-203ENST00000535510 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
PHC1-203ENST00000535510 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
PHC1-203ENST00000535510 WDR62O43379 1518 aa14.09□□□□□ -0.15
PHC1-203ENST00000535510 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
PHC1-203ENST00000535510 DNAJC5Q9H3Z4 198 aa14.06□□□□□ -0.16
PHC1-203ENST00000535510 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
PHC1-203ENST00000535510 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
PHC1-203ENST00000535510 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
PHC1-203ENST00000535510 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
PHC1-203ENST00000535510 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
PHC1-203ENST00000535510 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
PHC1-203ENST00000535510 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
PHC1-203ENST00000535510 SOGA1O94964 1423 aa13.78□□□□□ -0.2
PHC1-203ENST00000535510 POLA1P09884 1462 aaPredicted RBP13.78□□□□□ -0.2
PHC1-203ENST00000535510 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
PHC1-203ENST00000535510 CUX1P39880 1505 aa13.73□□□□□ -0.21
PHC1-203ENST00000535510 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
PHC1-203ENST00000535510 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
PHC1-203ENST00000535510 WDR97A6NE52 1622 aa13.71□□□□□ -0.22
PHC1-203ENST00000535510 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHC1-203ENST00000535510 RAD54L2Q9Y4B4 1467 aa13.7□□□□□ -0.22
PHC1-203ENST00000535510 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
PHC1-203ENST00000535510 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
PHC1-203ENST00000535510 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
PHC1-203ENST00000535510 FBLN2P98095 1184 aa13.64□□□□□ -0.23
PHC1-203ENST00000535510 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
PHC1-203ENST00000535510 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
PHC1-203ENST00000535510 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
PHC1-203ENST00000535510 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
PHC1-203ENST00000535510 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
PHC1-203ENST00000535510 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
PHC1-203ENST00000535510 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.24
PHC1-203ENST00000535510 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
PHC1-203ENST00000535510 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
PHC1-203ENST00000535510 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
PHC1-203ENST00000535510 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
PHC1-203ENST00000535510 CHD1O14646 1710 aa13.51□□□□□ -0.25
PHC1-203ENST00000535510 ABCA5Q8WWZ7 1642 aa13.51□□□□□ -0.25
PHC1-203ENST00000535510 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
PHC1-203ENST00000535510 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
PHC1-203ENST00000535510 ARHGEF11O15085 1522 aa13.46□□□□□ -0.25
PHC1-203ENST00000535510 FHAD1B1AJZ9 1412 aa13.46□□□□□ -0.26
PHC1-203ENST00000535510 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
PHC1-203ENST00000535510 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
PHC1-203ENST00000535510 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
PHC1-203ENST00000535510 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
PHC1-203ENST00000535510 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
PHC1-203ENST00000535510 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
PHC1-203ENST00000535510 CLASP1Q7Z460 1538 aa13.4□□□□□ -0.26
PHC1-203ENST00000535510 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
PHC1-203ENST00000535510 NUP160Q12769 1436 aa13.37□□□□□ -0.27
PHC1-203ENST00000535510 IGF1RP08069 1367 aa13.36□□□□□ -0.27
PHC1-203ENST00000535510 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
PHC1-203ENST00000535510 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
PHC1-203ENST00000535510 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
PHC1-203ENST00000535510 CUL7Q14999 1698 aa13.31□□□□□ -0.28
PHC1-203ENST00000535510 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
PHC1-203ENST00000535510 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
PHC1-203ENST00000535510 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms