RNA–Protein interactions for RNA: ENST00000535030.1

C12orf4-203, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 2

Gene C12orf4, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-203ENST00000535030 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
C12orf4-203ENST00000535030 ABCC9O60706 1549 aa23.46■■□□□ 1.35
C12orf4-203ENST00000535030 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
C12orf4-203ENST00000535030 DCAF8L2P0C7V8 631 aa22.42■■□□□ 1.18
C12orf4-203ENST00000535030 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
C12orf4-203ENST00000535030 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
C12orf4-203ENST00000535030 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
C12orf4-203ENST00000535030 NACADO15069 1562 aa21.99■■□□□ 1.11
C12orf4-203ENST00000535030 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
C12orf4-203ENST00000535030 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
C12orf4-203ENST00000535030 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
C12orf4-203ENST00000535030 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
C12orf4-203ENST00000535030 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
C12orf4-203ENST00000535030 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.06
C12orf4-203ENST00000535030 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
C12orf4-203ENST00000535030 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
C12orf4-203ENST00000535030 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
C12orf4-203ENST00000535030 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
C12orf4-203ENST00000535030 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
C12orf4-203ENST00000535030 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
C12orf4-203ENST00000535030 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
C12orf4-203ENST00000535030 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
C12orf4-203ENST00000535030 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
C12orf4-203ENST00000535030 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
C12orf4-203ENST00000535030 WIZO95785 1651 aa20.44■□□□□ 0.86
C12orf4-203ENST00000535030 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
C12orf4-203ENST00000535030 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
C12orf4-203ENST00000535030 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
C12orf4-203ENST00000535030 BAZ1BQ9UIG0 1483 aaKnown RBP20.26■□□□□ 0.83
C12orf4-203ENST00000535030 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
C12orf4-203ENST00000535030 CUX2O14529 1486 aa20.22■□□□□ 0.83
C12orf4-203ENST00000535030 NESP48681 1621 aa20.17■□□□□ 0.82
C12orf4-203ENST00000535030 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
C12orf4-203ENST00000535030 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
C12orf4-203ENST00000535030 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
C12orf4-203ENST00000535030 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
C12orf4-203ENST00000535030 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
C12orf4-203ENST00000535030 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
C12orf4-203ENST00000535030 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
C12orf4-203ENST00000535030 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
C12orf4-203ENST00000535030 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
C12orf4-203ENST00000535030 CFTRP13569 1480 aa19.65■□□□□ 0.74
C12orf4-203ENST00000535030 WDR62O43379 1518 aa19.61■□□□□ 0.73
C12orf4-203ENST00000535030 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
C12orf4-203ENST00000535030 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
C12orf4-203ENST00000535030 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
C12orf4-203ENST00000535030 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
C12orf4-203ENST00000535030 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
C12orf4-203ENST00000535030 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
C12orf4-203ENST00000535030 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
C12orf4-203ENST00000535030 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
C12orf4-203ENST00000535030 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.68
C12orf4-203ENST00000535030 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
C12orf4-203ENST00000535030 CUX1P39880 1505 aa19.3■□□□□ 0.68
C12orf4-203ENST00000535030 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
C12orf4-203ENST00000535030 OSCARQ8IYS5 282 aa19.26■□□□□ 0.67
C12orf4-203ENST00000535030 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
C12orf4-203ENST00000535030 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
C12orf4-203ENST00000535030 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
C12orf4-203ENST00000535030 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
C12orf4-203ENST00000535030 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
C12orf4-203ENST00000535030 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
C12orf4-203ENST00000535030 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
C12orf4-203ENST00000535030 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
C12orf4-203ENST00000535030 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
C12orf4-203ENST00000535030 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
C12orf4-203ENST00000535030 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
C12orf4-203ENST00000535030 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
C12orf4-203ENST00000535030 SOGA1O94964 1423 aa19.08■□□□□ 0.65
C12orf4-203ENST00000535030 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
C12orf4-203ENST00000535030 ARHGEF11O15085 1522 aa19.01■□□□□ 0.63
C12orf4-203ENST00000535030 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
C12orf4-203ENST00000535030 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
C12orf4-203ENST00000535030 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.63
C12orf4-203ENST00000535030 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
C12orf4-203ENST00000535030 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
C12orf4-203ENST00000535030 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
C12orf4-203ENST00000535030 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
C12orf4-203ENST00000535030 CHD1O14646 1710 aa18.91■□□□□ 0.62
C12orf4-203ENST00000535030 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
C12orf4-203ENST00000535030 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
C12orf4-203ENST00000535030 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
C12orf4-203ENST00000535030 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
C12orf4-203ENST00000535030 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
C12orf4-203ENST00000535030 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
C12orf4-203ENST00000535030 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
C12orf4-203ENST00000535030 FBLN2P98095 1184 aa18.77■□□□□ 0.6
C12orf4-203ENST00000535030 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
C12orf4-203ENST00000535030 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
C12orf4-203ENST00000535030 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
C12orf4-203ENST00000535030 IGF1RP08069 1367 aa18.74■□□□□ 0.59
C12orf4-203ENST00000535030 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
C12orf4-203ENST00000535030 EEA1Q15075 1411 aa18.71■□□□□ 0.59
C12orf4-203ENST00000535030 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
C12orf4-203ENST00000535030 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
C12orf4-203ENST00000535030 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
C12orf4-203ENST00000535030 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
C12orf4-203ENST00000535030 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
C12orf4-203ENST00000535030 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
C12orf4-203ENST00000535030 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms