RNA–Protein interactions for RNA: ENST00000534969.1

C1RL-204, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-204ENST00000534969 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
C1RL-204ENST00000534969 CCDC180Q9P1Z9 1646 aa24.11■■□□□ 1.45
C1RL-204ENST00000534969 ABCC9O60706 1549 aa23.64■■□□□ 1.38
C1RL-204ENST00000534969 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
C1RL-204ENST00000534969 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
C1RL-204ENST00000534969 NACADO15069 1562 aa22.7■■□□□ 1.22
C1RL-204ENST00000534969 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.21
C1RL-204ENST00000534969 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.19
C1RL-204ENST00000534969 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
C1RL-204ENST00000534969 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
C1RL-204ENST00000534969 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
C1RL-204ENST00000534969 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
C1RL-204ENST00000534969 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
C1RL-204ENST00000534969 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
C1RL-204ENST00000534969 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
C1RL-204ENST00000534969 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
C1RL-204ENST00000534969 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
C1RL-204ENST00000534969 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
C1RL-204ENST00000534969 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
C1RL-204ENST00000534969 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
C1RL-204ENST00000534969 SMARCA2P51531 1590 aa20.97■□□□□ 0.95
C1RL-204ENST00000534969 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
C1RL-204ENST00000534969 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
C1RL-204ENST00000534969 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
C1RL-204ENST00000534969 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
C1RL-204ENST00000534969 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
C1RL-204ENST00000534969 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
C1RL-204ENST00000534969 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
C1RL-204ENST00000534969 WIZO95785 1651 aa20.76■□□□□ 0.91
C1RL-204ENST00000534969 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
C1RL-204ENST00000534969 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
C1RL-204ENST00000534969 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
C1RL-204ENST00000534969 NESP48681 1621 aa20.43■□□□□ 0.86
C1RL-204ENST00000534969 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
C1RL-204ENST00000534969 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
C1RL-204ENST00000534969 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
C1RL-204ENST00000534969 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
C1RL-204ENST00000534969 CFTRP13569 1480 aa20.23■□□□□ 0.83
C1RL-204ENST00000534969 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
C1RL-204ENST00000534969 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
C1RL-204ENST00000534969 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
C1RL-204ENST00000534969 CUX2O14529 1486 aa20.08■□□□□ 0.81
C1RL-204ENST00000534969 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
C1RL-204ENST00000534969 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
C1RL-204ENST00000534969 PRDM2Q13029 1718 aa20.03■□□□□ 0.8
C1RL-204ENST00000534969 WDR62O43379 1518 aa19.93■□□□□ 0.78
C1RL-204ENST00000534969 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
C1RL-204ENST00000534969 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
C1RL-204ENST00000534969 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
C1RL-204ENST00000534969 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
C1RL-204ENST00000534969 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
C1RL-204ENST00000534969 CUX1P39880 1505 aa19.66■□□□□ 0.74
C1RL-204ENST00000534969 SOGA1O94964 1423 aa19.64■□□□□ 0.73
C1RL-204ENST00000534969 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
C1RL-204ENST00000534969 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
C1RL-204ENST00000534969 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
C1RL-204ENST00000534969 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
C1RL-204ENST00000534969 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
C1RL-204ENST00000534969 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
C1RL-204ENST00000534969 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
C1RL-204ENST00000534969 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.72
C1RL-204ENST00000534969 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
C1RL-204ENST00000534969 SYNJ1O43426 1573 aa19.51■□□□□ 0.71
C1RL-204ENST00000534969 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
C1RL-204ENST00000534969 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
C1RL-204ENST00000534969 FBLN2P98095 1184 aa19.43■□□□□ 0.7
C1RL-204ENST00000534969 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
C1RL-204ENST00000534969 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
C1RL-204ENST00000534969 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
C1RL-204ENST00000534969 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
C1RL-204ENST00000534969 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
C1RL-204ENST00000534969 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
C1RL-204ENST00000534969 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
C1RL-204ENST00000534969 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
C1RL-204ENST00000534969 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
C1RL-204ENST00000534969 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
C1RL-204ENST00000534969 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
C1RL-204ENST00000534969 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
C1RL-204ENST00000534969 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
C1RL-204ENST00000534969 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
C1RL-204ENST00000534969 CHD1O14646 1710 aa19.21■□□□□ 0.67
C1RL-204ENST00000534969 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
C1RL-204ENST00000534969 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
C1RL-204ENST00000534969 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
C1RL-204ENST00000534969 IGF1RP08069 1367 aa19.12■□□□□ 0.65
C1RL-204ENST00000534969 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
C1RL-204ENST00000534969 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
C1RL-204ENST00000534969 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
C1RL-204ENST00000534969 CUL7Q14999 1698 aa19.03■□□□□ 0.64
C1RL-204ENST00000534969 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
C1RL-204ENST00000534969 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
C1RL-204ENST00000534969 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
C1RL-204ENST00000534969 NUP160Q12769 1436 aa18.96■□□□□ 0.63
C1RL-204ENST00000534969 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
C1RL-204ENST00000534969 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
C1RL-204ENST00000534969 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
C1RL-204ENST00000534969 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
C1RL-204ENST00000534969 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
C1RL-204ENST00000534969 CSRNP3Q8WYN3 585 aa18.94■□□□□ 0.62
C1RL-204ENST00000534969 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms