RNA–Protein interactions for RNA: ENST00000534856.1

AP003108.1-201, humanhuman

TSL 4 BASIC

Gene AP003108.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.1-201ENST00000534856 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
AP003108.1-201ENST00000534856 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
AP003108.1-201ENST00000534856 ABCC9O60706 1549 aa27.08■■□□□ 1.93
AP003108.1-201ENST00000534856 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
AP003108.1-201ENST00000534856 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
AP003108.1-201ENST00000534856 NACADO15069 1562 aa26.05■■□□□ 1.76
AP003108.1-201ENST00000534856 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
AP003108.1-201ENST00000534856 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
AP003108.1-201ENST00000534856 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
AP003108.1-201ENST00000534856 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
AP003108.1-201ENST00000534856 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
AP003108.1-201ENST00000534856 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
AP003108.1-201ENST00000534856 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
AP003108.1-201ENST00000534856 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
AP003108.1-201ENST00000534856 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
AP003108.1-201ENST00000534856 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
AP003108.1-201ENST00000534856 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
AP003108.1-201ENST00000534856 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
AP003108.1-201ENST00000534856 SMARCA4P51532 1647 aa24.26■■□□□ 1.47
AP003108.1-201ENST00000534856 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
AP003108.1-201ENST00000534856 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
AP003108.1-201ENST00000534856 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
AP003108.1-201ENST00000534856 NCAPD3P42695 1498 aa24.06■■□□□ 1.44
AP003108.1-201ENST00000534856 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
AP003108.1-201ENST00000534856 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
AP003108.1-201ENST00000534856 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
AP003108.1-201ENST00000534856 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
AP003108.1-201ENST00000534856 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
AP003108.1-201ENST00000534856 WIZO95785 1651 aa23.89■■□□□ 1.42
AP003108.1-201ENST00000534856 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
AP003108.1-201ENST00000534856 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
AP003108.1-201ENST00000534856 NESP48681 1621 aa23.48■■□□□ 1.35
AP003108.1-201ENST00000534856 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
AP003108.1-201ENST00000534856 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
AP003108.1-201ENST00000534856 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
AP003108.1-201ENST00000534856 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
AP003108.1-201ENST00000534856 CFTRP13569 1480 aa23.26■■□□□ 1.31
AP003108.1-201ENST00000534856 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
AP003108.1-201ENST00000534856 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
AP003108.1-201ENST00000534856 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
AP003108.1-201ENST00000534856 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
AP003108.1-201ENST00000534856 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
AP003108.1-201ENST00000534856 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
AP003108.1-201ENST00000534856 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
AP003108.1-201ENST00000534856 CUX2O14529 1486 aa22.97■■□□□ 1.27
AP003108.1-201ENST00000534856 WDR62O43379 1518 aa22.91■■□□□ 1.26
AP003108.1-201ENST00000534856 URB2Q14146 1524 aaKnown RBP22.88■■□□□ 1.25
AP003108.1-201ENST00000534856 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
AP003108.1-201ENST00000534856 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
AP003108.1-201ENST00000534856 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
AP003108.1-201ENST00000534856 CUX1P39880 1505 aa22.65■■□□□ 1.22
AP003108.1-201ENST00000534856 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
AP003108.1-201ENST00000534856 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
AP003108.1-201ENST00000534856 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
AP003108.1-201ENST00000534856 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
AP003108.1-201ENST00000534856 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
AP003108.1-201ENST00000534856 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
AP003108.1-201ENST00000534856 SOGA1O94964 1423 aa22.49■■□□□ 1.19
AP003108.1-201ENST00000534856 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
AP003108.1-201ENST00000534856 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
AP003108.1-201ENST00000534856 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
AP003108.1-201ENST00000534856 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
AP003108.1-201ENST00000534856 AQRO60306 1485 aaKnown RBP eCLIP22.39■■□□□ 1.17
AP003108.1-201ENST00000534856 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
AP003108.1-201ENST00000534856 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
AP003108.1-201ENST00000534856 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
AP003108.1-201ENST00000534856 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
AP003108.1-201ENST00000534856 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
AP003108.1-201ENST00000534856 ABCA5Q8WWZ7 1642 aa22.21■■□□□ 1.15
AP003108.1-201ENST00000534856 GRIN2BQ13224 1484 aa22.2■■□□□ 1.14
AP003108.1-201ENST00000534856 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
AP003108.1-201ENST00000534856 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
AP003108.1-201ENST00000534856 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
AP003108.1-201ENST00000534856 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
AP003108.1-201ENST00000534856 MAGI1Q96QZ7 1491 aaPredicted RBP22.11■■□□□ 1.13
AP003108.1-201ENST00000534856 FBLN2P98095 1184 aa22.09■■□□□ 1.13
AP003108.1-201ENST00000534856 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
AP003108.1-201ENST00000534856 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
AP003108.1-201ENST00000534856 CHD1O14646 1710 aa22.04■■□□□ 1.12
AP003108.1-201ENST00000534856 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
AP003108.1-201ENST00000534856 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
AP003108.1-201ENST00000534856 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
AP003108.1-201ENST00000534856 ADAMTS12P58397 1594 aa22■■□□□ 1.11
AP003108.1-201ENST00000534856 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
AP003108.1-201ENST00000534856 IGF1RP08069 1367 aa21.98■■□□□ 1.11
AP003108.1-201ENST00000534856 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
AP003108.1-201ENST00000534856 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
AP003108.1-201ENST00000534856 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
AP003108.1-201ENST00000534856 CUL7Q14999 1698 aa21.85■■□□□ 1.09
AP003108.1-201ENST00000534856 CARMIL1Q5VZK9 1371 aa21.85■■□□□ 1.09
AP003108.1-201ENST00000534856 CLASP1Q7Z460 1538 aa21.83■■□□□ 1.09
AP003108.1-201ENST00000534856 NUP160Q12769 1436 aa21.81■■□□□ 1.08
AP003108.1-201ENST00000534856 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
AP003108.1-201ENST00000534856 RAPGEF2Q9Y4G8 1499 aa21.72■■□□□ 1.07
AP003108.1-201ENST00000534856 ARHGEF11O15085 1522 aa21.72■■□□□ 1.07
AP003108.1-201ENST00000534856 FAM9AQ8IZU1 332 aaPredicted RBP21.72■■□□□ 1.07
AP003108.1-201ENST00000534856 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
AP003108.1-201ENST00000534856 EEA1Q15075 1411 aa21.72■■□□□ 1.07
AP003108.1-201ENST00000534856 RIMBP3CA6NJZ7 1639 aa21.7■■□□□ 1.06
AP003108.1-201ENST00000534856 RIMBP3BA6NNM3 1639 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms