RNA–Protein interactions for RNA: ENST00000534805.5

SETDB1-217, Transcript of SET domain bifurcated 1, humanhuman

TSL 1 (best)

Gene SETDB1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-217ENST00000534805 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
SETDB1-217ENST00000534805 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
SETDB1-217ENST00000534805 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
SETDB1-217ENST00000534805 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
SETDB1-217ENST00000534805 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
SETDB1-217ENST00000534805 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
SETDB1-217ENST00000534805 ABCC9O60706 1549 aa21.89■■□□□ 1.09
SETDB1-217ENST00000534805 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
SETDB1-217ENST00000534805 NACADO15069 1562 aa21.57■■□□□ 1.04
SETDB1-217ENST00000534805 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
SETDB1-217ENST00000534805 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
SETDB1-217ENST00000534805 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1
SETDB1-217ENST00000534805 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
SETDB1-217ENST00000534805 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
SETDB1-217ENST00000534805 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
SETDB1-217ENST00000534805 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.93
SETDB1-217ENST00000534805 BICRAQ9NZM4 1560 aa20.78■□□□□ 0.92
SETDB1-217ENST00000534805 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
SETDB1-217ENST00000534805 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
SETDB1-217ENST00000534805 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
SETDB1-217ENST00000534805 WIZO95785 1651 aa20.67■□□□□ 0.9
SETDB1-217ENST00000534805 SMARCA4P51532 1647 aa20.58■□□□□ 0.88
SETDB1-217ENST00000534805 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
SETDB1-217ENST00000534805 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
SETDB1-217ENST00000534805 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
SETDB1-217ENST00000534805 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
SETDB1-217ENST00000534805 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
SETDB1-217ENST00000534805 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
SETDB1-217ENST00000534805 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
SETDB1-217ENST00000534805 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
SETDB1-217ENST00000534805 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
SETDB1-217ENST00000534805 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
SETDB1-217ENST00000534805 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
SETDB1-217ENST00000534805 FAM9AQ8IZU1 332 aaPredicted RBP19.92■□□□□ 0.78
SETDB1-217ENST00000534805 HMGXB3Q12766 1538 aa19.9■□□□□ 0.78
SETDB1-217ENST00000534805 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
SETDB1-217ENST00000534805 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
SETDB1-217ENST00000534805 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
SETDB1-217ENST00000534805 SOGA1O94964 1423 aa19.66■□□□□ 0.74
SETDB1-217ENST00000534805 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
SETDB1-217ENST00000534805 CFTRP13569 1480 aa19.62■□□□□ 0.73
SETDB1-217ENST00000534805 RUSC2Q8N2Y8 1516 aa19.59■□□□□ 0.73
SETDB1-217ENST00000534805 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
SETDB1-217ENST00000534805 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
SETDB1-217ENST00000534805 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
SETDB1-217ENST00000534805 EEA1Q15075 1411 aa19.48■□□□□ 0.71
SETDB1-217ENST00000534805 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
SETDB1-217ENST00000534805 CUX1P39880 1505 aa19.44■□□□□ 0.7
SETDB1-217ENST00000534805 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
SETDB1-217ENST00000534805 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
SETDB1-217ENST00000534805 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
SETDB1-217ENST00000534805 NESP48681 1621 aa19.33■□□□□ 0.68
SETDB1-217ENST00000534805 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
SETDB1-217ENST00000534805 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
SETDB1-217ENST00000534805 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
SETDB1-217ENST00000534805 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
SETDB1-217ENST00000534805 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
SETDB1-217ENST00000534805 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
SETDB1-217ENST00000534805 KIF21BO75037 1637 aa19.25■□□□□ 0.67
SETDB1-217ENST00000534805 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
SETDB1-217ENST00000534805 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
SETDB1-217ENST00000534805 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
SETDB1-217ENST00000534805 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
SETDB1-217ENST00000534805 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
SETDB1-217ENST00000534805 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
SETDB1-217ENST00000534805 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
SETDB1-217ENST00000534805 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
SETDB1-217ENST00000534805 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
SETDB1-217ENST00000534805 CUX2O14529 1486 aa19.1■□□□□ 0.65
SETDB1-217ENST00000534805 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
SETDB1-217ENST00000534805 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
SETDB1-217ENST00000534805 IGF1RP08069 1367 aa19.06■□□□□ 0.64
SETDB1-217ENST00000534805 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
SETDB1-217ENST00000534805 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
SETDB1-217ENST00000534805 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
SETDB1-217ENST00000534805 CLIP1P30622 1438 aa19.03■□□□□ 0.64
SETDB1-217ENST00000534805 KIF21AQ7Z4S6 1674 aa19■□□□□ 0.63
SETDB1-217ENST00000534805 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
SETDB1-217ENST00000534805 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
SETDB1-217ENST00000534805 HRCP23327 699 aa18.97■□□□□ 0.63
SETDB1-217ENST00000534805 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
SETDB1-217ENST00000534805 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
SETDB1-217ENST00000534805 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
SETDB1-217ENST00000534805 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
SETDB1-217ENST00000534805 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
SETDB1-217ENST00000534805 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
SETDB1-217ENST00000534805 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
SETDB1-217ENST00000534805 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
SETDB1-217ENST00000534805 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
SETDB1-217ENST00000534805 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
SETDB1-217ENST00000534805 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
SETDB1-217ENST00000534805 CUL7Q14999 1698 aa18.73■□□□□ 0.59
SETDB1-217ENST00000534805 APLP2Q06481 763 aa18.7■□□□□ 0.58
SETDB1-217ENST00000534805 WDR62O43379 1518 aa18.69■□□□□ 0.58
SETDB1-217ENST00000534805 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.581e-10■□□□□ 8.5
SETDB1-217ENST00000534805 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
SETDB1-217ENST00000534805 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
SETDB1-217ENST00000534805 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
SETDB1-217ENST00000534805 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
SETDB1-217ENST00000534805 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms