RNA–Protein interactions for RNA: ENST00000534479.5

DKK3-215, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 1,087 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-215ENST00000534479 NISCHQ9Y2I1 1504 aa47.19■■■■■ 5.14
DKK3-215ENST00000534479 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
DKK3-215ENST00000534479 ABCC9O60706 1549 aa40.34■■■■■ 4.05
DKK3-215ENST00000534479 ZCCHC6Q5VYS8 1495 aaKnown RBP39.43■■■■□ 3.9
DKK3-215ENST00000534479 DCAF8L2P0C7V8 631 aa39.2■■■■□ 3.87
DKK3-215ENST00000534479 NACADO15069 1562 aa39.12■■■■□ 3.85
DKK3-215ENST00000534479 RB1CC1Q8TDY2 1594 aa39.07■■■■□ 3.84
DKK3-215ENST00000534479 DCAF1Q9Y4B6 1507 aa39.06■■■■□ 3.84
DKK3-215ENST00000534479 MYO15BQ96JP2 1530 aa39.02■■■■□ 3.84
DKK3-215ENST00000534479 UNC13AQ9UPW8 1703 aa38.31■■■■□ 3.72
DKK3-215ENST00000534479 SCRIBQ14160 1630 aa38.19■■■■□ 3.7
DKK3-215ENST00000534479 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
DKK3-215ENST00000534479 PABPN1Q86U42 306 aaKnown RBP eCLIP37.73■■■■□ 3.63
DKK3-215ENST00000534479 SHROOM4Q9ULL8 1493 aa37.59■■■■□ 3.61
DKK3-215ENST00000534479 EIF4G1Q04637 1599 aaKnown RBP36.81■■■■□ 3.48
DKK3-215ENST00000534479 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
DKK3-215ENST00000534479 BAZ1AQ9NRL2 1556 aaPredicted RBP36.57■■■■□ 3.44
DKK3-215ENST00000534479 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
DKK3-215ENST00000534479 CC2D2AQ9P2K1 1620 aa36.55■■■■□ 3.44
DKK3-215ENST00000534479 DNAJC5BQ9UF47 199 aa36.46■■■■□ 3.43
DKK3-215ENST00000534479 MROH2BQ7Z745 1585 aa36.38■■■■□ 3.41
DKK3-215ENST00000534479 SMARCA2P51531 1590 aa36.19■■■■□ 3.38
DKK3-215ENST00000534479 PEG3Q9GZU2 1588 aa36.16■■■■□ 3.38
DKK3-215ENST00000534479 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
DKK3-215ENST00000534479 RSF1Q96T23 1441 aaPredicted RBP36.11■■■■□ 3.37
DKK3-215ENST00000534479 WIZO95785 1651 aa36.08■■■■□ 3.37
DKK3-215ENST00000534479 NCAPD3P42695 1498 aa36.04■■■■□ 3.36
DKK3-215ENST00000534479 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
DKK3-215ENST00000534479 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
DKK3-215ENST00000534479 TOP2AP11388 1531 aaKnown RBP35.7■■■■□ 3.31
DKK3-215ENST00000534479 SUPT5HO00267 1087 aaKnown RBP35.62■■■■□ 3.29
DKK3-215ENST00000534479 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
DKK3-215ENST00000534479 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
DKK3-215ENST00000534479 NESP48681 1621 aa35.06■■■■□ 3.2
DKK3-215ENST00000534479 CADPSQ9ULU8 1353 aa35.01■■■■□ 3.2
DKK3-215ENST00000534479 CFTRP13569 1480 aa34.92■■■■□ 3.18
DKK3-215ENST00000534479 PRDM2Q13029 1718 aa34.92■■■■□ 3.18
DKK3-215ENST00000534479 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
DKK3-215ENST00000534479 PDS5BQ9NTI5 1447 aa34.77■■■■□ 3.16
DKK3-215ENST00000534479 ERCC6Q03468 1493 aa34.74■■■■□ 3.15
DKK3-215ENST00000534479 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
DKK3-215ENST00000534479 CEP164Q9UPV0 1460 aa34.58■■■■□ 3.13
DKK3-215ENST00000534479 THOC2Q8NI27 1593 aaKnown RBP34.47■■■■□ 3.11
DKK3-215ENST00000534479 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
DKK3-215ENST00000534479 WDR62O43379 1518 aa34.29■■■■□ 3.08
DKK3-215ENST00000534479 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
DKK3-215ENST00000534479 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.07
DKK3-215ENST00000534479 ABCC8Q09428 1581 aa34.19■■■■□ 3.06
DKK3-215ENST00000534479 TOPBP1Q92547 1522 aa34.17■■■■□ 3.06
DKK3-215ENST00000534479 CUX2O14529 1486 aa34.16■■■■□ 3.06
DKK3-215ENST00000534479 CUX1P39880 1505 aa34.1■■■■□ 3.05
DKK3-215ENST00000534479 WRNQ14191 1432 aaPredicted RBP eCLIP34.06■■■■□ 3.04
DKK3-215ENST00000534479 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
DKK3-215ENST00000534479 SYNJ1O43426 1573 aa34■■■■□ 3.03
DKK3-215ENST00000534479 TOP2BQ02880 1626 aa33.98■■■■□ 3.03
DKK3-215ENST00000534479 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
DKK3-215ENST00000534479 POLA1P09884 1462 aaPredicted RBP33.9■■■■□ 3.02
DKK3-215ENST00000534479 IFT140Q96RY7 1462 aa33.82■■■■□ 3
DKK3-215ENST00000534479 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
DKK3-215ENST00000534479 SOGA1O94964 1423 aa33.76■■■□□ 2.99
DKK3-215ENST00000534479 RAD54L2Q9Y4B4 1467 aa33.76■■■□□ 2.99
DKK3-215ENST00000534479 WDR97A6NE52 1622 aa33.7■■■□□ 2.99
DKK3-215ENST00000534479 TRIM41Q8WV44 630 aa33.61■■■□□ 2.97
DKK3-215ENST00000534479 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
DKK3-215ENST00000534479 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
DKK3-215ENST00000534479 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
DKK3-215ENST00000534479 CHIC1Q5VXU3 224 aa33.52■■■□□ 2.96
DKK3-215ENST00000534479 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
DKK3-215ENST00000534479 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.95
DKK3-215ENST00000534479 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
DKK3-215ENST00000534479 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
DKK3-215ENST00000534479 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
DKK3-215ENST00000534479 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
DKK3-215ENST00000534479 KIF27Q86VH2 1401 aa33.31■■■□□ 2.92
DKK3-215ENST00000534479 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
DKK3-215ENST00000534479 SNAPC4Q5SXM2 1469 aa33.21■■■□□ 2.91
DKK3-215ENST00000534479 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
DKK3-215ENST00000534479 RUSC2Q8N2Y8 1516 aa33.18■■■□□ 2.9
DKK3-215ENST00000534479 CHD1O14646 1710 aa33.12■■■□□ 2.89
DKK3-215ENST00000534479 ADAMTS12P58397 1594 aa33.11■■■□□ 2.89
DKK3-215ENST00000534479 CUL7Q14999 1698 aa33.08■■■□□ 2.89
DKK3-215ENST00000534479 IGF1RP08069 1367 aa33.07■■■□□ 2.88
DKK3-215ENST00000534479 SYNJ2O15056 1496 aa33.04■■■□□ 2.88
DKK3-215ENST00000534479 EEA1Q15075 1411 aa33.02■■■□□ 2.88
DKK3-215ENST00000534479 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
DKK3-215ENST00000534479 FBLN2P98095 1184 aa32.98■■■□□ 2.87
DKK3-215ENST00000534479 CHMP7Q8WUX9 453 aaPredicted RBP32.96■■■□□ 2.87
DKK3-215ENST00000534479 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
DKK3-215ENST00000534479 CARMIL1Q5VZK9 1371 aa32.92■■■□□ 2.86
DKK3-215ENST00000534479 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
DKK3-215ENST00000534479 GRIN2AQ12879 1464 aa32.9■■■□□ 2.86
DKK3-215ENST00000534479 CSRNP3Q8WYN3 585 aa32.87■■■□□ 2.85
DKK3-215ENST00000534479 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
DKK3-215ENST00000534479 OSCARQ8IYS5 282 aa32.8■■■□□ 2.84
DKK3-215ENST00000534479 PRXQ9BXM0 1461 aa32.78■■■□□ 2.84
DKK3-215ENST00000534479 CEP170Q5SW79 1584 aa32.74■■■□□ 2.83
DKK3-215ENST00000534479 KIF21BO75037 1637 aa32.7■■■□□ 2.83
DKK3-215ENST00000534479 NUP160Q12769 1436 aa32.7■■■□□ 2.83
DKK3-215ENST00000534479 CLASP1Q7Z460 1538 aa32.67■■■□□ 2.82
DKK3-215ENST00000534479 CTTNBP2Q8WZ74 1663 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms