RNA–Protein interactions for RNA: ENST00000534466.1

PDE4DIP-235, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 4

Gene PDE4DIP, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-235ENST00000534466 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
PDE4DIP-235ENST00000534466 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
PDE4DIP-235ENST00000534466 ABCC9O60706 1549 aa27.38■■□□□ 1.97
PDE4DIP-235ENST00000534466 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
PDE4DIP-235ENST00000534466 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
PDE4DIP-235ENST00000534466 RB1CC1Q8TDY2 1594 aa26.34■■□□□ 1.81
PDE4DIP-235ENST00000534466 NACADO15069 1562 aa26.32■■□□□ 1.8
PDE4DIP-235ENST00000534466 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
PDE4DIP-235ENST00000534466 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
PDE4DIP-235ENST00000534466 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
PDE4DIP-235ENST00000534466 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
PDE4DIP-235ENST00000534466 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
PDE4DIP-235ENST00000534466 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
PDE4DIP-235ENST00000534466 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
PDE4DIP-235ENST00000534466 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
PDE4DIP-235ENST00000534466 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
PDE4DIP-235ENST00000534466 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
PDE4DIP-235ENST00000534466 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
PDE4DIP-235ENST00000534466 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
PDE4DIP-235ENST00000534466 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
PDE4DIP-235ENST00000534466 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
PDE4DIP-235ENST00000534466 ATAD2BQ9ULI0 1458 aa24.34■■□□□ 1.49
PDE4DIP-235ENST00000534466 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
PDE4DIP-235ENST00000534466 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
PDE4DIP-235ENST00000534466 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
PDE4DIP-235ENST00000534466 WIZO95785 1651 aa24.2■■□□□ 1.46
PDE4DIP-235ENST00000534466 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
PDE4DIP-235ENST00000534466 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
PDE4DIP-235ENST00000534466 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
PDE4DIP-235ENST00000534466 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
PDE4DIP-235ENST00000534466 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
PDE4DIP-235ENST00000534466 NESP48681 1621 aa23.73■■□□□ 1.39
PDE4DIP-235ENST00000534466 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
PDE4DIP-235ENST00000534466 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
PDE4DIP-235ENST00000534466 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
PDE4DIP-235ENST00000534466 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
PDE4DIP-235ENST00000534466 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
PDE4DIP-235ENST00000534466 CFTRP13569 1480 aa23.48■■□□□ 1.35
PDE4DIP-235ENST00000534466 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
PDE4DIP-235ENST00000534466 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
PDE4DIP-235ENST00000534466 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
PDE4DIP-235ENST00000534466 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
PDE4DIP-235ENST00000534466 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
PDE4DIP-235ENST00000534466 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
PDE4DIP-235ENST00000534466 CUX2O14529 1486 aa23.21■■□□□ 1.31
PDE4DIP-235ENST00000534466 WDR62O43379 1518 aa23.14■■□□□ 1.3
PDE4DIP-235ENST00000534466 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
PDE4DIP-235ENST00000534466 TOPBP1Q92547 1522 aa23■■□□□ 1.27
PDE4DIP-235ENST00000534466 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
PDE4DIP-235ENST00000534466 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
PDE4DIP-235ENST00000534466 CUX1P39880 1505 aa22.89■■□□□ 1.26
PDE4DIP-235ENST00000534466 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
PDE4DIP-235ENST00000534466 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
PDE4DIP-235ENST00000534466 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
PDE4DIP-235ENST00000534466 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
PDE4DIP-235ENST00000534466 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
PDE4DIP-235ENST00000534466 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
PDE4DIP-235ENST00000534466 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
PDE4DIP-235ENST00000534466 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
PDE4DIP-235ENST00000534466 BIVM-ERCC5R4GMW8 1640 aa22.72■■□□□ 1.23
PDE4DIP-235ENST00000534466 SOGA1O94964 1423 aa22.72■■□□□ 1.23
PDE4DIP-235ENST00000534466 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
PDE4DIP-235ENST00000534466 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
PDE4DIP-235ENST00000534466 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.21
PDE4DIP-235ENST00000534466 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
PDE4DIP-235ENST00000534466 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
PDE4DIP-235ENST00000534466 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
PDE4DIP-235ENST00000534466 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
PDE4DIP-235ENST00000534466 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
PDE4DIP-235ENST00000534466 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
PDE4DIP-235ENST00000534466 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
PDE4DIP-235ENST00000534466 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
PDE4DIP-235ENST00000534466 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
PDE4DIP-235ENST00000534466 CHD1O14646 1710 aa22.37■■□□□ 1.17
PDE4DIP-235ENST00000534466 FBLN2P98095 1184 aa22.35■■□□□ 1.17
PDE4DIP-235ENST00000534466 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
PDE4DIP-235ENST00000534466 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
PDE4DIP-235ENST00000534466 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
PDE4DIP-235ENST00000534466 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
PDE4DIP-235ENST00000534466 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
PDE4DIP-235ENST00000534466 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
PDE4DIP-235ENST00000534466 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
PDE4DIP-235ENST00000534466 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
PDE4DIP-235ENST00000534466 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
PDE4DIP-235ENST00000534466 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
PDE4DIP-235ENST00000534466 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
PDE4DIP-235ENST00000534466 IGF1RP08069 1367 aa22.17■■□□□ 1.14
PDE4DIP-235ENST00000534466 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
PDE4DIP-235ENST00000534466 CUL7Q14999 1698 aa22.12■■□□□ 1.13
PDE4DIP-235ENST00000534466 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
PDE4DIP-235ENST00000534466 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
PDE4DIP-235ENST00000534466 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
PDE4DIP-235ENST00000534466 NUP160Q12769 1436 aa22.01■■□□□ 1.11
PDE4DIP-235ENST00000534466 FAM9AQ8IZU1 332 aaPredicted RBP21.98■■□□□ 1.11
PDE4DIP-235ENST00000534466 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
PDE4DIP-235ENST00000534466 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
PDE4DIP-235ENST00000534466 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
PDE4DIP-235ENST00000534466 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
PDE4DIP-235ENST00000534466 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
PDE4DIP-235ENST00000534466 EEA1Q15075 1411 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms