RNA–Protein interactions for RNA: ENST00000534249.5

C11orf49-221, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 5

Gene C11orf49, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-221ENST00000534249 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
C11orf49-221ENST00000534249 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
C11orf49-221ENST00000534249 ABCC9O60706 1549 aa17.51■□□□□ 0.39
C11orf49-221ENST00000534249 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
C11orf49-221ENST00000534249 NACADO15069 1562 aa16.89■□□□□ 0.29
C11orf49-221ENST00000534249 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
C11orf49-221ENST00000534249 DCAF8L2P0C7V8 631 aa16.87■□□□□ 0.29
C11orf49-221ENST00000534249 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.28
C11orf49-221ENST00000534249 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
C11orf49-221ENST00000534249 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
C11orf49-221ENST00000534249 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
C11orf49-221ENST00000534249 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
C11orf49-221ENST00000534249 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
C11orf49-221ENST00000534249 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
C11orf49-221ENST00000534249 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
C11orf49-221ENST00000534249 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
C11orf49-221ENST00000534249 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
C11orf49-221ENST00000534249 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
C11orf49-221ENST00000534249 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
C11orf49-221ENST00000534249 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
C11orf49-221ENST00000534249 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
C11orf49-221ENST00000534249 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
C11orf49-221ENST00000534249 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
C11orf49-221ENST00000534249 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
C11orf49-221ENST00000534249 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
C11orf49-221ENST00000534249 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
C11orf49-221ENST00000534249 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
C11orf49-221ENST00000534249 WIZO95785 1651 aa15.51■□□□□ 0.07
C11orf49-221ENST00000534249 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
C11orf49-221ENST00000534249 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
C11orf49-221ENST00000534249 NESP48681 1621 aa15.21■□□□□ 0.02
C11orf49-221ENST00000534249 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
C11orf49-221ENST00000534249 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
C11orf49-221ENST00000534249 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
C11orf49-221ENST00000534249 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
C11orf49-221ENST00000534249 CFTRP13569 1480 aa15.08■□□□□ 0
C11orf49-221ENST00000534249 ERCC6Q03468 1493 aa15.06■□□□□ 0
C11orf49-221ENST00000534249 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
C11orf49-221ENST00000534249 PDS5BQ9NTI5 1447 aa15.02■□□□□ -0
C11orf49-221ENST00000534249 PRDM2Q13029 1718 aa15□□□□□ -0.01
C11orf49-221ENST00000534249 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
C11orf49-221ENST00000534249 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
C11orf49-221ENST00000534249 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
C11orf49-221ENST00000534249 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
C11orf49-221ENST00000534249 CUX2O14529 1486 aa14.86□□□□□ -0.03
C11orf49-221ENST00000534249 WDR62O43379 1518 aa14.85□□□□□ -0.03
C11orf49-221ENST00000534249 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.04
C11orf49-221ENST00000534249 TOPBP1Q92547 1522 aa14.75□□□□□ -0.05
C11orf49-221ENST00000534249 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
C11orf49-221ENST00000534249 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
C11orf49-221ENST00000534249 CUX1P39880 1505 aa14.69□□□□□ -0.06
C11orf49-221ENST00000534249 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
C11orf49-221ENST00000534249 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
C11orf49-221ENST00000534249 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
C11orf49-221ENST00000534249 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
C11orf49-221ENST00000534249 IFT140Q96RY7 1462 aa14.61□□□□□ -0.07
C11orf49-221ENST00000534249 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
C11orf49-221ENST00000534249 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
C11orf49-221ENST00000534249 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
C11orf49-221ENST00000534249 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
C11orf49-221ENST00000534249 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
C11orf49-221ENST00000534249 SOGA1O94964 1423 aa14.55□□□□□ -0.08
C11orf49-221ENST00000534249 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
C11orf49-221ENST00000534249 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
C11orf49-221ENST00000534249 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.09
C11orf49-221ENST00000534249 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
C11orf49-221ENST00000534249 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
C11orf49-221ENST00000534249 ABCA5Q8WWZ7 1642 aa14.42□□□□□ -0.1
C11orf49-221ENST00000534249 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
C11orf49-221ENST00000534249 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
C11orf49-221ENST00000534249 GRIN2BQ13224 1484 aa14.38□□□□□ -0.11
C11orf49-221ENST00000534249 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
C11orf49-221ENST00000534249 CHD1O14646 1710 aa14.32□□□□□ -0.12
C11orf49-221ENST00000534249 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
C11orf49-221ENST00000534249 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
C11orf49-221ENST00000534249 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
C11orf49-221ENST00000534249 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
C11orf49-221ENST00000534249 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
C11orf49-221ENST00000534249 ADAMTS12P58397 1594 aa14.27□□□□□ -0.12
C11orf49-221ENST00000534249 SYNJ2O15056 1496 aa14.27□□□□□ -0.12
C11orf49-221ENST00000534249 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
C11orf49-221ENST00000534249 FBLN2P98095 1184 aa14.25□□□□□ -0.13
C11orf49-221ENST00000534249 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
C11orf49-221ENST00000534249 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
C11orf49-221ENST00000534249 IGF1RP08069 1367 aa14.23□□□□□ -0.13
C11orf49-221ENST00000534249 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
C11orf49-221ENST00000534249 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
C11orf49-221ENST00000534249 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
C11orf49-221ENST00000534249 CUL7Q14999 1698 aa14.19□□□□□ -0.14
C11orf49-221ENST00000534249 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
C11orf49-221ENST00000534249 CEP170Q5SW79 1584 aa14.14□□□□□ -0.15
C11orf49-221ENST00000534249 NUP160Q12769 1436 aa14.14□□□□□ -0.15
C11orf49-221ENST00000534249 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
C11orf49-221ENST00000534249 EEA1Q15075 1411 aa14.07□□□□□ -0.16
C11orf49-221ENST00000534249 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
C11orf49-221ENST00000534249 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
C11orf49-221ENST00000534249 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
C11orf49-221ENST00000534249 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
C11orf49-221ENST00000534249 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
C11orf49-221ENST00000534249 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms