RNA–Protein interactions for RNA: ENST00000534072.1

GPAA1-218, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-218ENST00000534072 NISCHQ9Y2I1 1504 aa43.71■■■■■ 4.59
GPAA1-218ENST00000534072 CCDC180Q9P1Z9 1646 aa38.58■■■■□ 3.77
GPAA1-218ENST00000534072 ABCC9O60706 1549 aa37.12■■■■□ 3.53
GPAA1-218ENST00000534072 ZCCHC6Q5VYS8 1495 aaKnown RBP36.54■■■■□ 3.44
GPAA1-218ENST00000534072 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
GPAA1-218ENST00000534072 DCAF1Q9Y4B6 1507 aa36.18■■■■□ 3.38
GPAA1-218ENST00000534072 NACADO15069 1562 aa36.11■■■■□ 3.37
GPAA1-218ENST00000534072 MYO15BQ96JP2 1530 aa36.07■■■■□ 3.36
GPAA1-218ENST00000534072 RB1CC1Q8TDY2 1594 aa36.02■■■■□ 3.36
GPAA1-218ENST00000534072 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
GPAA1-218ENST00000534072 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
GPAA1-218ENST00000534072 SHROOM4Q9ULL8 1493 aa35.02■■■■□ 3.2
GPAA1-218ENST00000534072 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
GPAA1-218ENST00000534072 PABPN1Q86U42 306 aaKnown RBP eCLIP34.81■■■■□ 3.166e-6■□□□□ 9.1
GPAA1-218ENST00000534072 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
GPAA1-218ENST00000534072 EIF4G1Q04637 1599 aaKnown RBP33.89■■■■□ 3.02
GPAA1-218ENST00000534072 BAZ1AQ9NRL2 1556 aaPredicted RBP33.86■■■■□ 3.01
GPAA1-218ENST00000534072 SMARCA4P51532 1647 aa33.79■■■■□ 3
GPAA1-218ENST00000534072 MROH2BQ7Z745 1585 aa33.69■■■□□ 2.98
GPAA1-218ENST00000534072 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
GPAA1-218ENST00000534072 CC2D2AQ9P2K1 1620 aa33.59■■■□□ 2.97
GPAA1-218ENST00000534072 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
GPAA1-218ENST00000534072 SMARCA2P51531 1590 aa33.45■■■□□ 2.95
GPAA1-218ENST00000534072 ATAD2BQ9ULI0 1458 aa33.41■■■□□ 2.94
GPAA1-218ENST00000534072 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
GPAA1-218ENST00000534072 WIZO95785 1651 aa33.39■■■□□ 2.94
GPAA1-218ENST00000534072 SUPT5HO00267 1087 aaKnown RBP33.33■■■□□ 2.93
GPAA1-218ENST00000534072 NCAPD3P42695 1498 aa33.28■■■□□ 2.92
GPAA1-218ENST00000534072 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
GPAA1-218ENST00000534072 HMGXB3Q12766 1538 aa33.2■■■□□ 2.91
GPAA1-218ENST00000534072 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.89
GPAA1-218ENST00000534072 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
GPAA1-218ENST00000534072 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
GPAA1-218ENST00000534072 LAMC3Q9Y6N6 1575 aa32.34■■■□□ 2.77
GPAA1-218ENST00000534072 CFTRP13569 1480 aa32.3■■■□□ 2.76
GPAA1-218ENST00000534072 NESP48681 1621 aa32.29■■■□□ 2.76
GPAA1-218ENST00000534072 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
GPAA1-218ENST00000534072 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
GPAA1-218ENST00000534072 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
GPAA1-218ENST00000534072 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
GPAA1-218ENST00000534072 KIF21AQ7Z4S6 1674 aa31.96■■■□□ 2.71
GPAA1-218ENST00000534072 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
GPAA1-218ENST00000534072 MRC2Q9UBG0 1479 aa31.73■■■□□ 2.67
GPAA1-218ENST00000534072 ABCC8Q09428 1581 aa31.7■■■□□ 2.67
GPAA1-218ENST00000534072 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
GPAA1-218ENST00000534072 THOC2Q8NI27 1593 aaKnown RBP31.64■■■□□ 2.66
GPAA1-218ENST00000534072 URB2Q14146 1524 aaKnown RBP31.63■■■□□ 2.65
GPAA1-218ENST00000534072 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
GPAA1-218ENST00000534072 TOPBP1Q92547 1522 aa31.58■■■□□ 2.65
GPAA1-218ENST00000534072 WDR62O43379 1518 aa31.57■■■□□ 2.64
GPAA1-218ENST00000534072 CUX1P39880 1505 aa31.57■■■□□ 2.64
GPAA1-218ENST00000534072 CUX2O14529 1486 aa31.55■■■□□ 2.64
GPAA1-218ENST00000534072 SYNJ1O43426 1573 aa31.51■■■□□ 2.63
GPAA1-218ENST00000534072 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
GPAA1-218ENST00000534072 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
GPAA1-218ENST00000534072 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
GPAA1-218ENST00000534072 TRIM41Q8WV44 630 aa31.44■■■□□ 2.62
GPAA1-218ENST00000534072 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
GPAA1-218ENST00000534072 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
GPAA1-218ENST00000534072 SOGA1O94964 1423 aa31.26■■■□□ 2.6
GPAA1-218ENST00000534072 IFT140Q96RY7 1462 aa31.22■■■□□ 2.59
GPAA1-218ENST00000534072 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
GPAA1-218ENST00000534072 TARBP1Q13395 1621 aaKnown RBP31.15■■■□□ 2.58
GPAA1-218ENST00000534072 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
GPAA1-218ENST00000534072 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
GPAA1-218ENST00000534072 TDRD9Q8NDG6 1382 aaKnown RBP30.99■■■□□ 2.55
GPAA1-218ENST00000534072 ZNF608Q9ULD9 1512 aaPredicted RBP30.98■■■□□ 2.55
GPAA1-218ENST00000534072 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
GPAA1-218ENST00000534072 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
GPAA1-218ENST00000534072 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.544e-8■■■■■ 31.4
GPAA1-218ENST00000534072 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
GPAA1-218ENST00000534072 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
GPAA1-218ENST00000534072 EEA1Q15075 1411 aa30.83■■■□□ 2.53
GPAA1-218ENST00000534072 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
GPAA1-218ENST00000534072 GRIN2BQ13224 1484 aa30.82■■■□□ 2.52
GPAA1-218ENST00000534072 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
GPAA1-218ENST00000534072 FAM9AQ8IZU1 332 aaPredicted RBP30.78■■■□□ 2.52
GPAA1-218ENST00000534072 ERICH3Q5RHP9 1530 aa30.75■■■□□ 2.51
GPAA1-218ENST00000534072 IGF1RP08069 1367 aa30.7■■■□□ 2.51
GPAA1-218ENST00000534072 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
GPAA1-218ENST00000534072 SNAPC4Q5SXM2 1469 aa30.67■■■□□ 2.5
GPAA1-218ENST00000534072 MAGI1Q96QZ7 1491 aaPredicted RBP30.65■■■□□ 2.5
GPAA1-218ENST00000534072 CUL7Q14999 1698 aa30.63■■■□□ 2.49
GPAA1-218ENST00000534072 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
GPAA1-218ENST00000534072 FHAD1B1AJZ9 1412 aa30.57■■■□□ 2.48
GPAA1-218ENST00000534072 ADAMTS12P58397 1594 aa30.57■■■□□ 2.48
GPAA1-218ENST00000534072 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
GPAA1-218ENST00000534072 FBLN2P98095 1184 aa30.52■■■□□ 2.48
GPAA1-218ENST00000534072 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
GPAA1-218ENST00000534072 PRXQ9BXM0 1461 aa30.48■■■□□ 2.47
GPAA1-218ENST00000534072 RAPGEF2Q9Y4G8 1499 aa30.47■■■□□ 2.47
GPAA1-218ENST00000534072 CHD1O14646 1710 aa30.43■■■□□ 2.46
GPAA1-218ENST00000534072 DNAJC5Q9H3Z4 198 aa30.43■■■□□ 2.46
GPAA1-218ENST00000534072 KIF21BO75037 1637 aa30.43■■■□□ 2.46
GPAA1-218ENST00000534072 GRIN2AQ12879 1464 aa30.4■■■□□ 2.46
GPAA1-218ENST00000534072 EHMT2Q96KQ7 1210 aa30.36■■■□□ 2.45
GPAA1-218ENST00000534072 GOLGA3Q08378 1498 aa30.33■■■□□ 2.45
GPAA1-218ENST00000534072 UBTFP17480 764 aaKnown RBP30.26■■■□□ 2.43
GPAA1-218ENST00000534072 OSCARQ8IYS5 282 aa30.22■■■□□ 2.43
GPAA1-218ENST00000534072 NUP160Q12769 1436 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms