RNA–Protein interactions for RNA: ENST00000534044.5

MYB-238, Transcript of MYB proto-oncogene, transcription factor, human

TSL 1 (best) BASIC

Gene MYB, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MYB-238	ENST00000534044	NISCH	Q9Y2I1	1504 aa		18.28	■□□□□ 0.52
MYB-238	ENST00000534044	CCDC180	Q9P1Z9	1646 aa		15.98	■□□□□ 0.15
MYB-238	ENST00000534044	ABCC9	O60706	1549 aa		15.36	■□□□□ 0.05
MYB-238	ENST00000534044	ZCCHC6	Q5VYS8	1495 aa	Known RBP	15.29	■□□□□ 0.04
MYB-238	ENST00000534044	DCAF8L2	P0C7V8	631 aa		15.28	■□□□□ 0.04
MYB-238	ENST00000534044	DCAF1	Q9Y4B6	1507 aa		15.09	■□□□□ 0.01
MYB-238	ENST00000534044	MYO15B	Q96JP2	1530 aa		14.99	□□□□□ -0.01
MYB-238	ENST00000534044	NACAD	O15069	1562 aa		14.96	□□□□□ -0.01
MYB-238	ENST00000534044	RB1CC1	Q8TDY2	1594 aa		14.89	□□□□□ -0.03
MYB-238	ENST00000534044	SHROOM4	Q9ULL8	1493 aa		14.83	□□□□□ -0.04
MYB-238	ENST00000534044	SCRIB	Q14160	1630 aa		14.7	□□□□□ -0.06
MYB-238	ENST00000534044	UNC13A	Q9UPW8	1703 aa		14.57	□□□□□ -0.08
MYB-238	ENST00000534044	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.49	□□□□□ -0.09
MYB-238	ENST00000534044	BICRA	Q9NZM4	1560 aa		14.43	□□□□□ -0.1
MYB-238	ENST00000534044	CHIC1	Q5VXU3	224 aa		14.29	□□□□□ -0.12
MYB-238	ENST00000534044	CECR2	Q9BXF3	1484 aa		14.24	□□□□□ -0.13
MYB-238	ENST00000534044	SUPT5H	O00267	1087 aa	Known RBP	14.2	□□□□□ -0.14
MYB-238	ENST00000534044	RSF1	Q96T23	1441 aa	Predicted RBP	14.13	□□□□□ -0.15
MYB-238	ENST00000534044	MROH2B	Q7Z745	1585 aa		14.12	□□□□□ -0.15
MYB-238	ENST00000534044	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	14.12	□□□□□ -0.15
MYB-238	ENST00000534044	SMARCA4	P51532	1647 aa		14.08	□□□□□ -0.16
MYB-238	ENST00000534044	EIF4G1	Q04637	1599 aa	Known RBP	14.03	□□□□□ -0.16
MYB-238	ENST00000534044	WIZ	O95785	1651 aa		13.99	□□□□□ -0.17
MYB-238	ENST00000534044	ATAD2B	Q9ULI0	1458 aa		13.92	□□□□□ -0.18
MYB-238	ENST00000534044	PEG3	Q9GZU2	1588 aa		13.91	□□□□□ -0.18
MYB-238	ENST00000534044	SMARCA2	P51531	1590 aa		13.89	□□□□□ -0.19
MYB-238	ENST00000534044	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.89	□□□□□ -0.19
MYB-238	ENST00000534044	CC2D2A	Q9P2K1	1620 aa		13.87	□□□□□ -0.19
MYB-238	ENST00000534044	NCAPD3	P42695	1498 aa		13.84	□□□□□ -0.19
MYB-238	ENST00000534044	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.83	□□□□□ -0.2
MYB-238	ENST00000534044	TOP2A	P11388	1531 aa	Known RBP	13.81	□□□□□ -0.2
MYB-238	ENST00000534044	DNAJC5B	Q9UF47	199 aa		13.78	□□□□□ -0.2
MYB-238	ENST00000534044	HMGXB3	Q12766	1538 aa		13.77	□□□□□ -0.21
MYB-238	ENST00000534044	CCDC88B	A6NC98	1476 aa		13.71	□□□□□ -0.21
MYB-238	ENST00000534044	CADPS	Q9ULU8	1353 aa		13.49	□□□□□ -0.25
MYB-238	ENST00000534044	CFTR	P13569	1480 aa		13.47	□□□□□ -0.25
MYB-238	ENST00000534044	NES	P48681	1621 aa		13.42	□□□□□ -0.26
MYB-238	ENST00000534044	LAMC3	Q9Y6N6	1575 aa		13.38	□□□□□ -0.27
MYB-238	ENST00000534044	TRIM41	Q8WV44	630 aa		13.36	□□□□□ -0.27
MYB-238	ENST00000534044	ABCC8	Q09428	1581 aa		13.35	□□□□□ -0.27
MYB-238	ENST00000534044	PRDM2	Q13029	1718 aa		13.34	□□□□□ -0.27
MYB-238	ENST00000534044	FANCD2	Q9BXW9	1451 aa		13.32	□□□□□ -0.28
MYB-238	ENST00000534044	PDS5B	Q9NTI5	1447 aa		13.31	□□□□□ -0.28
MYB-238	ENST00000534044	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.3	□□□□□ -0.28
MYB-238	ENST00000534044	CEP164	Q9UPV0	1460 aa		13.24	□□□□□ -0.29
MYB-238	ENST00000534044	KIF21A	Q7Z4S6	1674 aa		13.23	□□□□□ -0.29
MYB-238	ENST00000534044	SYNJ1	O43426	1573 aa		13.22	□□□□□ -0.29
MYB-238	ENST00000534044	CUX1	P39880	1505 aa		13.2	□□□□□ -0.3
MYB-238	ENST00000534044	TOP2B	Q02880	1626 aa		13.19	□□□□□ -0.3
MYB-238	ENST00000534044	ERCC6	Q03468	1493 aa		13.18	□□□□□ -0.3
MYB-238	ENST00000534044	BIVM-ERCC5	R4GMW8	1640 aa		13.16	□□□□□ -0.3
MYB-238	ENST00000534044	URB2	Q14146	1524 aa	Known RBP	13.15	□□□□□ -0.3
MYB-238	ENST00000534044	TOPBP1	Q92547	1522 aa		13.14	□□□□□ -0.31
MYB-238	ENST00000534044	DNMBP	Q6XZF7	1577 aa		13.13	□□□□□ -0.31
MYB-238	ENST00000534044	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.12	□□□□□ -0.31
MYB-238	ENST00000534044	MRC2	Q9UBG0	1479 aa		13.12	□□□□□ -0.31
MYB-238	ENST00000534044	FGD5	Q6ZNL6	1462 aa		13.1	□□□□□ -0.31
MYB-238	ENST00000534044	SOGA1	O94964	1423 aa		13.08	□□□□□ -0.32
MYB-238	ENST00000534044	POLA1	P09884	1462 aa	Predicted RBP	13.07	□□□□□ -0.32
MYB-238	ENST00000534044	WDR62	O43379	1518 aa		13.04	□□□□□ -0.32
MYB-238	ENST00000534044	RUSC2	Q8N2Y8	1516 aa		13.04	□□□□□ -0.32
MYB-238	ENST00000534044	THOC2	Q8NI27	1593 aa	Known RBP	13.04	□□□□□ -0.32
MYB-238	ENST00000534044	RAD54L2	Q9Y4B4	1467 aa		13.04	□□□□□ -0.32
MYB-238	ENST00000534044	CSRNP3	Q8WYN3	585 aa		13	□□□□□ -0.33
MYB-238	ENST00000534044	CUX2	O14529	1486 aa		12.99	□□□□□ -0.33
MYB-238	ENST00000534044	EEA1	Q15075	1411 aa		12.99	□□□□□ -0.33
MYB-238	ENST00000534044	LOC105371045	A0A1W2PR82	267 aa		12.98	□□□□□ -0.33
MYB-238	ENST00000534044	KIF27	Q86VH2	1401 aa		12.98	□□□□□ -0.33
MYB-238	ENST00000534044	ABCA10	Q8WWZ4	1543 aa		12.97	□□□□□ -0.33
MYB-238	ENST00000534044	TDRD9	Q8NDG6	1382 aa	Known RBP	12.96	□□□□□ -0.34
MYB-238	ENST00000534044	TARBP1	Q13395	1621 aa	Known RBP	12.95	□□□□□ -0.34
MYB-238	ENST00000534044	EHMT2	Q96KQ7	1210 aa		12.95	□□□□□ -0.34
MYB-238	ENST00000534044	IFT140	Q96RY7	1462 aa		12.94	□□□□□ -0.34
MYB-238	ENST00000534044	IGF1R	P08069	1367 aa		12.92	□□□□□ -0.34
MYB-238	ENST00000534044	WDR97	A6NE52	1622 aa		12.9	□□□□□ -0.34
MYB-238	ENST00000534044	AQR	O60306	1485 aa	Known RBP eCLIP	12.9	□□□□□ -0.34	5e-7	■■■■■ 28.4
MYB-238	ENST00000534044	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.89	□□□□□ -0.35
MYB-238	ENST00000534044	GAPVD1	Q14C86	1478 aa		12.89	□□□□□ -0.35
MYB-238	ENST00000534044	ABCA5	Q8WWZ7	1642 aa		12.85	□□□□□ -0.35
MYB-238	ENST00000534044	CARMIL1	Q5VZK9	1371 aa		12.84	□□□□□ -0.35
MYB-238	ENST00000534044	UBTF	P17480	764 aa	Known RBP	12.83	□□□□□ -0.35
MYB-238	ENST00000534044	PRX	Q9BXM0	1461 aa		12.83	□□□□□ -0.36
MYB-238	ENST00000534044	ERICH3	Q5RHP9	1530 aa		12.82	□□□□□ -0.36
MYB-238	ENST00000534044	GRIN2B	Q13224	1484 aa		12.81	□□□□□ -0.36
MYB-238	ENST00000534044	RAPGEF2	Q9Y4G8	1499 aa		12.81	□□□□□ -0.36
MYB-238	ENST00000534044	KIF21B	O75037	1637 aa		12.8	□□□□□ -0.36
MYB-238	ENST00000534044	EIF4G3	O43432	1585 aa	Known RBP	12.8	□□□□□ -0.36
MYB-238	ENST00000534044	GOLGA3	Q08378	1498 aa		12.8	□□□□□ -0.36
MYB-238	ENST00000534044	PBRM1	Q86U86	1689 aa		12.78	□□□□□ -0.36
MYB-238	ENST00000534044	CUL7	Q14999	1698 aa		12.76	□□□□□ -0.37
MYB-238	ENST00000534044	TNIK	Q9UKE5	1360 aa		12.75	□□□□□ -0.37
MYB-238	ENST00000534044	FHAD1	B1AJZ9	1412 aa		12.74	□□□□□ -0.37
MYB-238	ENST00000534044	SNAPC4	Q5SXM2	1469 aa		12.74	□□□□□ -0.37
MYB-238	ENST00000534044	FBLN2	P98095	1184 aa		12.72	□□□□□ -0.37
MYB-238	ENST00000534044	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.72	□□□□□ -0.37
MYB-238	ENST00000534044	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.71	□□□□□ -0.37
MYB-238	ENST00000534044	ADAMTS12	P58397	1594 aa		12.7	□□□□□ -0.38
MYB-238	ENST00000534044	RANGAP1	P46060	587 aa	Predicted RBP	12.69	□□□□□ -0.38
MYB-238	ENST00000534044	SYNJ2	O15056	1496 aa		12.67	□□□□□ -0.38
MYB-238	ENST00000534044	CEP162	Q5TB80	1403 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 365.6 ms