RNA–Protein interactions for RNA: ENST00000533918.5

IFT46-210, Transcript of intraflagellar transport 46, humanhuman

TSL 4

Gene IFT46, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-210ENST00000533918 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
IFT46-210ENST00000533918 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
IFT46-210ENST00000533918 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
IFT46-210ENST00000533918 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
IFT46-210ENST00000533918 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
IFT46-210ENST00000533918 ABCC9O60706 1549 aa21.61■■□□□ 1.05
IFT46-210ENST00000533918 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
IFT46-210ENST00000533918 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
IFT46-210ENST00000533918 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
IFT46-210ENST00000533918 NACADO15069 1562 aa21.34■■□□□ 1.01
IFT46-210ENST00000533918 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
IFT46-210ENST00000533918 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
IFT46-210ENST00000533918 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
IFT46-210ENST00000533918 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
IFT46-210ENST00000533918 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
IFT46-210ENST00000533918 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
IFT46-210ENST00000533918 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
IFT46-210ENST00000533918 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
IFT46-210ENST00000533918 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
IFT46-210ENST00000533918 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
IFT46-210ENST00000533918 SMARCA4P51532 1647 aa20.02■□□□□ 0.79
IFT46-210ENST00000533918 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
IFT46-210ENST00000533918 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
IFT46-210ENST00000533918 WIZO95785 1651 aa19.83■□□□□ 0.76
IFT46-210ENST00000533918 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.76
IFT46-210ENST00000533918 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
IFT46-210ENST00000533918 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
IFT46-210ENST00000533918 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
IFT46-210ENST00000533918 NCAPD3P42695 1498 aa19.66■□□□□ 0.74
IFT46-210ENST00000533918 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
IFT46-210ENST00000533918 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
IFT46-210ENST00000533918 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
IFT46-210ENST00000533918 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
IFT46-210ENST00000533918 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
IFT46-210ENST00000533918 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
IFT46-210ENST00000533918 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
IFT46-210ENST00000533918 CFTRP13569 1480 aa19.14■□□□□ 0.65
IFT46-210ENST00000533918 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
IFT46-210ENST00000533918 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
IFT46-210ENST00000533918 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
IFT46-210ENST00000533918 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
IFT46-210ENST00000533918 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
IFT46-210ENST00000533918 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
IFT46-210ENST00000533918 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
IFT46-210ENST00000533918 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
IFT46-210ENST00000533918 NESP48681 1621 aa18.87■□□□□ 0.61
IFT46-210ENST00000533918 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
IFT46-210ENST00000533918 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
IFT46-210ENST00000533918 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
IFT46-210ENST00000533918 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
IFT46-210ENST00000533918 CUX1P39880 1505 aa18.73■□□□□ 0.59
IFT46-210ENST00000533918 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
IFT46-210ENST00000533918 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
IFT46-210ENST00000533918 EEA1Q15075 1411 aa18.69■□□□□ 0.58
IFT46-210ENST00000533918 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
IFT46-210ENST00000533918 TOPBP1Q92547 1522 aa18.64■□□□□ 0.58
IFT46-210ENST00000533918 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
IFT46-210ENST00000533918 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
IFT46-210ENST00000533918 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
IFT46-210ENST00000533918 SOGA1O94964 1423 aa18.53■□□□□ 0.56
IFT46-210ENST00000533918 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
IFT46-210ENST00000533918 WDR62O43379 1518 aa18.53■□□□□ 0.56
IFT46-210ENST00000533918 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
IFT46-210ENST00000533918 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.55
IFT46-210ENST00000533918 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
IFT46-210ENST00000533918 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
IFT46-210ENST00000533918 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
IFT46-210ENST00000533918 CUX2O14529 1486 aa18.45■□□□□ 0.54
IFT46-210ENST00000533918 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
IFT46-210ENST00000533918 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
IFT46-210ENST00000533918 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
IFT46-210ENST00000533918 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
IFT46-210ENST00000533918 TARBP1Q13395 1621 aaKnown RBP18.36■□□□□ 0.53
IFT46-210ENST00000533918 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
IFT46-210ENST00000533918 KIF21BO75037 1637 aa18.34■□□□□ 0.53
IFT46-210ENST00000533918 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
IFT46-210ENST00000533918 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
IFT46-210ENST00000533918 IGF1RP08069 1367 aa18.3■□□□□ 0.52
IFT46-210ENST00000533918 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
IFT46-210ENST00000533918 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
IFT46-210ENST00000533918 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
IFT46-210ENST00000533918 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
IFT46-210ENST00000533918 CUL7Q14999 1698 aa18.26■□□□□ 0.51
IFT46-210ENST00000533918 UBTFP17480 764 aaKnown RBP18.25■□□□□ 0.51
IFT46-210ENST00000533918 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
IFT46-210ENST00000533918 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
IFT46-210ENST00000533918 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
IFT46-210ENST00000533918 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
IFT46-210ENST00000533918 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
IFT46-210ENST00000533918 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
IFT46-210ENST00000533918 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
IFT46-210ENST00000533918 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
IFT46-210ENST00000533918 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
IFT46-210ENST00000533918 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
IFT46-210ENST00000533918 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
IFT46-210ENST00000533918 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
IFT46-210ENST00000533918 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
IFT46-210ENST00000533918 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
IFT46-210ENST00000533918 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
IFT46-210ENST00000533918 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms