RNA–Protein interactions for RNA: ENST00000533748.1

AP003035.1-201, humanhuman

BASIC

Gene AP003035.1, Length 1,417 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003035.1-201ENST00000533748 NISCHQ9Y2I1 1504 aa24.46■■□□□ 1.51
AP003035.1-201ENST00000533748 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
AP003035.1-201ENST00000533748 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
AP003035.1-201ENST00000533748 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
AP003035.1-201ENST00000533748 ABCC9O60706 1549 aa20.77■□□□□ 0.91
AP003035.1-201ENST00000533748 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.88
AP003035.1-201ENST00000533748 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
AP003035.1-201ENST00000533748 NACADO15069 1562 aa20.24■□□□□ 0.83
AP003035.1-201ENST00000533748 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
AP003035.1-201ENST00000533748 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
AP003035.1-201ENST00000533748 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
AP003035.1-201ENST00000533748 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
AP003035.1-201ENST00000533748 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
AP003035.1-201ENST00000533748 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
AP003035.1-201ENST00000533748 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
AP003035.1-201ENST00000533748 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
AP003035.1-201ENST00000533748 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
AP003035.1-201ENST00000533748 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
AP003035.1-201ENST00000533748 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
AP003035.1-201ENST00000533748 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
AP003035.1-201ENST00000533748 SMARCA4P51532 1647 aa18.98■□□□□ 0.63
AP003035.1-201ENST00000533748 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
AP003035.1-201ENST00000533748 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
AP003035.1-201ENST00000533748 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
AP003035.1-201ENST00000533748 PEG3Q9GZU2 1588 aa18.78■□□□□ 0.6
AP003035.1-201ENST00000533748 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
AP003035.1-201ENST00000533748 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
AP003035.1-201ENST00000533748 WIZO95785 1651 aa18.72■□□□□ 0.59
AP003035.1-201ENST00000533748 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
AP003035.1-201ENST00000533748 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
AP003035.1-201ENST00000533748 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
AP003035.1-201ENST00000533748 NCAPD3P42695 1498 aa18.6■□□□□ 0.57
AP003035.1-201ENST00000533748 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
AP003035.1-201ENST00000533748 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
AP003035.1-201ENST00000533748 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
AP003035.1-201ENST00000533748 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
AP003035.1-201ENST00000533748 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
AP003035.1-201ENST00000533748 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
AP003035.1-201ENST00000533748 FOXD1Q16676 465 aa18.11■□□□□ 0.49
AP003035.1-201ENST00000533748 NESP48681 1621 aa18.09■□□□□ 0.49
AP003035.1-201ENST00000533748 CFTRP13569 1480 aa18.07■□□□□ 0.48
AP003035.1-201ENST00000533748 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
AP003035.1-201ENST00000533748 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
AP003035.1-201ENST00000533748 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
AP003035.1-201ENST00000533748 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
AP003035.1-201ENST00000533748 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
AP003035.1-201ENST00000533748 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
AP003035.1-201ENST00000533748 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
AP003035.1-201ENST00000533748 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
AP003035.1-201ENST00000533748 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
AP003035.1-201ENST00000533748 WDR62O43379 1518 aa17.75■□□□□ 0.43
AP003035.1-201ENST00000533748 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
AP003035.1-201ENST00000533748 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
AP003035.1-201ENST00000533748 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.42
AP003035.1-201ENST00000533748 CUX1P39880 1505 aa17.7■□□□□ 0.42
AP003035.1-201ENST00000533748 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
AP003035.1-201ENST00000533748 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
AP003035.1-201ENST00000533748 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
AP003035.1-201ENST00000533748 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
AP003035.1-201ENST00000533748 CUX2O14529 1486 aa17.58■□□□□ 0.4
AP003035.1-201ENST00000533748 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
AP003035.1-201ENST00000533748 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
AP003035.1-201ENST00000533748 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
AP003035.1-201ENST00000533748 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
AP003035.1-201ENST00000533748 IFT140Q96RY7 1462 aa17.46■□□□□ 0.38
AP003035.1-201ENST00000533748 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
AP003035.1-201ENST00000533748 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
AP003035.1-201ENST00000533748 EIF4G3O43432 1585 aaKnown RBP17.42■□□□□ 0.38
AP003035.1-201ENST00000533748 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
AP003035.1-201ENST00000533748 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
AP003035.1-201ENST00000533748 SOGA1O94964 1423 aa17.39■□□□□ 0.37
AP003035.1-201ENST00000533748 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
AP003035.1-201ENST00000533748 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
AP003035.1-201ENST00000533748 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
AP003035.1-201ENST00000533748 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
AP003035.1-201ENST00000533748 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
AP003035.1-201ENST00000533748 KIF27Q86VH2 1401 aa17.24■□□□□ 0.35
AP003035.1-201ENST00000533748 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
AP003035.1-201ENST00000533748 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
AP003035.1-201ENST00000533748 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
AP003035.1-201ENST00000533748 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
AP003035.1-201ENST00000533748 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
AP003035.1-201ENST00000533748 CUL7Q14999 1698 aa17.2■□□□□ 0.34
AP003035.1-201ENST00000533748 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
AP003035.1-201ENST00000533748 EEA1Q15075 1411 aa17.16■□□□□ 0.34
AP003035.1-201ENST00000533748 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
AP003035.1-201ENST00000533748 CHD1O14646 1710 aa17.14■□□□□ 0.33
AP003035.1-201ENST00000533748 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
AP003035.1-201ENST00000533748 IGF1RP08069 1367 aa17.07■□□□□ 0.32
AP003035.1-201ENST00000533748 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
AP003035.1-201ENST00000533748 KIF21BO75037 1637 aa17.06■□□□□ 0.32
AP003035.1-201ENST00000533748 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
AP003035.1-201ENST00000533748 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
AP003035.1-201ENST00000533748 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.31
AP003035.1-201ENST00000533748 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
AP003035.1-201ENST00000533748 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
AP003035.1-201ENST00000533748 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
AP003035.1-201ENST00000533748 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
AP003035.1-201ENST00000533748 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
AP003035.1-201ENST00000533748 ADRA2BP18089 450 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 341.6 ms