RNA–Protein interactions for RNA: ENST00000533709.1

CRTAM-203, Transcript of cytotoxic and regulatory T cell molecule, humanhuman

TSL 1 (best) BASIC

Gene CRTAM, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAM-203ENST00000533709 NISCHQ9Y2I1 1504 aa24.02■■□□□ 1.44
CRTAM-203ENST00000533709 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
CRTAM-203ENST00000533709 ABCC9O60706 1549 aa20.59■□□□□ 0.89
CRTAM-203ENST00000533709 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
CRTAM-203ENST00000533709 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
CRTAM-203ENST00000533709 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
CRTAM-203ENST00000533709 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
CRTAM-203ENST00000533709 NACADO15069 1562 aa19.82■□□□□ 0.76
CRTAM-203ENST00000533709 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
CRTAM-203ENST00000533709 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
CRTAM-203ENST00000533709 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
CRTAM-203ENST00000533709 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
CRTAM-203ENST00000533709 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
CRTAM-203ENST00000533709 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
CRTAM-203ENST00000533709 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
CRTAM-203ENST00000533709 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
CRTAM-203ENST00000533709 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
CRTAM-203ENST00000533709 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
CRTAM-203ENST00000533709 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
CRTAM-203ENST00000533709 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
CRTAM-203ENST00000533709 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
CRTAM-203ENST00000533709 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
CRTAM-203ENST00000533709 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
CRTAM-203ENST00000533709 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
CRTAM-203ENST00000533709 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
CRTAM-203ENST00000533709 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
CRTAM-203ENST00000533709 WIZO95785 1651 aa18.36■□□□□ 0.53
CRTAM-203ENST00000533709 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
CRTAM-203ENST00000533709 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
CRTAM-203ENST00000533709 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
CRTAM-203ENST00000533709 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
CRTAM-203ENST00000533709 HMGXB3Q12766 1538 aa18.19■□□□□ 0.5
CRTAM-203ENST00000533709 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
CRTAM-203ENST00000533709 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
CRTAM-203ENST00000533709 NESP48681 1621 aa17.91■□□□□ 0.46
CRTAM-203ENST00000533709 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
CRTAM-203ENST00000533709 CFTRP13569 1480 aa17.79■□□□□ 0.44
CRTAM-203ENST00000533709 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
CRTAM-203ENST00000533709 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
CRTAM-203ENST00000533709 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
CRTAM-203ENST00000533709 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
CRTAM-203ENST00000533709 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
CRTAM-203ENST00000533709 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
CRTAM-203ENST00000533709 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
CRTAM-203ENST00000533709 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
CRTAM-203ENST00000533709 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
CRTAM-203ENST00000533709 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
CRTAM-203ENST00000533709 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
CRTAM-203ENST00000533709 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CRTAM-203ENST00000533709 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
CRTAM-203ENST00000533709 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
CRTAM-203ENST00000533709 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
CRTAM-203ENST00000533709 CUX1P39880 1505 aa17.38■□□□□ 0.37
CRTAM-203ENST00000533709 WDR62O43379 1518 aa17.37■□□□□ 0.37
CRTAM-203ENST00000533709 DNMBPQ6XZF7 1577 aa17.33■□□□□ 0.37
CRTAM-203ENST00000533709 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
CRTAM-203ENST00000533709 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
CRTAM-203ENST00000533709 CUX2O14529 1486 aa17.3■□□□□ 0.36
CRTAM-203ENST00000533709 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
CRTAM-203ENST00000533709 SOGA1O94964 1423 aa17.27■□□□□ 0.36
CRTAM-203ENST00000533709 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
CRTAM-203ENST00000533709 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
CRTAM-203ENST00000533709 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
CRTAM-203ENST00000533709 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
CRTAM-203ENST00000533709 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
CRTAM-203ENST00000533709 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
CRTAM-203ENST00000533709 ZNF608Q9ULD9 1512 aaPredicted RBP17.17■□□□□ 0.34
CRTAM-203ENST00000533709 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.34
CRTAM-203ENST00000533709 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
CRTAM-203ENST00000533709 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.33
CRTAM-203ENST00000533709 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
CRTAM-203ENST00000533709 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
CRTAM-203ENST00000533709 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
CRTAM-203ENST00000533709 KIF27Q86VH2 1401 aa17■□□□□ 0.31
CRTAM-203ENST00000533709 FBLN2P98095 1184 aa17■□□□□ 0.31
CRTAM-203ENST00000533709 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
CRTAM-203ENST00000533709 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
CRTAM-203ENST00000533709 IGF1RP08069 1367 aa16.97■□□□□ 0.31
CRTAM-203ENST00000533709 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
CRTAM-203ENST00000533709 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
CRTAM-203ENST00000533709 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
CRTAM-203ENST00000533709 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
CRTAM-203ENST00000533709 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
CRTAM-203ENST00000533709 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
CRTAM-203ENST00000533709 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
CRTAM-203ENST00000533709 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
CRTAM-203ENST00000533709 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
CRTAM-203ENST00000533709 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
CRTAM-203ENST00000533709 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
CRTAM-203ENST00000533709 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
CRTAM-203ENST00000533709 EEA1Q15075 1411 aa16.81■□□□□ 0.28
CRTAM-203ENST00000533709 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
CRTAM-203ENST00000533709 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
CRTAM-203ENST00000533709 PRXQ9BXM0 1461 aa16.74■□□□□ 0.27
CRTAM-203ENST00000533709 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
CRTAM-203ENST00000533709 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
CRTAM-203ENST00000533709 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
CRTAM-203ENST00000533709 CHD1O14646 1710 aa16.7■□□□□ 0.26
CRTAM-203ENST00000533709 CUL7Q14999 1698 aa16.7■□□□□ 0.26
CRTAM-203ENST00000533709 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms