RNA–Protein interactions for RNA: ENST00000533598.5

XRRA1-217, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 3

Gene XRRA1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-217ENST00000533598 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
XRRA1-217ENST00000533598 CCDC180Q9P1Z9 1646 aa32.78■■■□□ 2.84
XRRA1-217ENST00000533598 ABCC9O60706 1549 aa31.79■■■□□ 2.68
XRRA1-217ENST00000533598 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
XRRA1-217ENST00000533598 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
XRRA1-217ENST00000533598 NACADO15069 1562 aa30.73■■■□□ 2.51
XRRA1-217ENST00000533598 RB1CC1Q8TDY2 1594 aa30.7■■■□□ 2.5
XRRA1-217ENST00000533598 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
XRRA1-217ENST00000533598 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
XRRA1-217ENST00000533598 AEBP2Q6ZN18 517 aaPredicted RBP30.28■■■□□ 2.44
XRRA1-217ENST00000533598 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
XRRA1-217ENST00000533598 SCRIBQ14160 1630 aa29.94■■■□□ 2.38
XRRA1-217ENST00000533598 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
XRRA1-217ENST00000533598 PABPN1Q86U42 306 aaKnown RBP eCLIP29.74■■■□□ 2.35
XRRA1-217ENST00000533598 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
XRRA1-217ENST00000533598 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
XRRA1-217ENST00000533598 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
XRRA1-217ENST00000533598 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
XRRA1-217ENST00000533598 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
XRRA1-217ENST00000533598 CC2D2AQ9P2K1 1620 aa28.77■■■□□ 2.2
XRRA1-217ENST00000533598 SMARCA4P51532 1647 aa28.66■■■□□ 2.18
XRRA1-217ENST00000533598 BAZ1AQ9NRL2 1556 aaPredicted RBP28.66■■■□□ 2.18
XRRA1-217ENST00000533598 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
XRRA1-217ENST00000533598 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
XRRA1-217ENST00000533598 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
XRRA1-217ENST00000533598 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
XRRA1-217ENST00000533598 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
XRRA1-217ENST00000533598 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
XRRA1-217ENST00000533598 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
XRRA1-217ENST00000533598 WIZO95785 1651 aa28.25■■■□□ 2.11
XRRA1-217ENST00000533598 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
XRRA1-217ENST00000533598 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
XRRA1-217ENST00000533598 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
XRRA1-217ENST00000533598 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
XRRA1-217ENST00000533598 NESP48681 1621 aa27.6■■■□□ 2.01
XRRA1-217ENST00000533598 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
XRRA1-217ENST00000533598 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
XRRA1-217ENST00000533598 CFTRP13569 1480 aa27.44■■□□□ 1.98
XRRA1-217ENST00000533598 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
XRRA1-217ENST00000533598 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
XRRA1-217ENST00000533598 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
XRRA1-217ENST00000533598 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
XRRA1-217ENST00000533598 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
XRRA1-217ENST00000533598 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
XRRA1-217ENST00000533598 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.93
XRRA1-217ENST00000533598 MRC2Q9UBG0 1479 aa27.07■■□□□ 1.92
XRRA1-217ENST00000533598 WDR62O43379 1518 aa26.98■■□□□ 1.91
XRRA1-217ENST00000533598 CUX2O14529 1486 aa26.97■■□□□ 1.91
XRRA1-217ENST00000533598 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.9
XRRA1-217ENST00000533598 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
XRRA1-217ENST00000533598 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
XRRA1-217ENST00000533598 ABCC8Q09428 1581 aa26.83■■□□□ 1.89
XRRA1-217ENST00000533598 CUX1P39880 1505 aa26.74■■□□□ 1.87
XRRA1-217ENST00000533598 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
XRRA1-217ENST00000533598 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
XRRA1-217ENST00000533598 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
XRRA1-217ENST00000533598 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
XRRA1-217ENST00000533598 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
XRRA1-217ENST00000533598 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
XRRA1-217ENST00000533598 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
XRRA1-217ENST00000533598 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
XRRA1-217ENST00000533598 RAD54L2Q9Y4B4 1467 aa26.51■■□□□ 1.83
XRRA1-217ENST00000533598 SOGA1O94964 1423 aa26.5■■□□□ 1.83
XRRA1-217ENST00000533598 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.83
XRRA1-217ENST00000533598 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
XRRA1-217ENST00000533598 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
XRRA1-217ENST00000533598 ABCA10Q8WWZ4 1543 aa26.36■■□□□ 1.81
XRRA1-217ENST00000533598 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
XRRA1-217ENST00000533598 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
XRRA1-217ENST00000533598 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
XRRA1-217ENST00000533598 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
XRRA1-217ENST00000533598 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
XRRA1-217ENST00000533598 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
XRRA1-217ENST00000533598 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
XRRA1-217ENST00000533598 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
XRRA1-217ENST00000533598 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
XRRA1-217ENST00000533598 KIF27Q86VH2 1401 aa26.08■■□□□ 1.77
XRRA1-217ENST00000533598 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
XRRA1-217ENST00000533598 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
XRRA1-217ENST00000533598 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
XRRA1-217ENST00000533598 CHD1O14646 1710 aa26■■□□□ 1.75
XRRA1-217ENST00000533598 ADAMTS12P58397 1594 aa25.97■■□□□ 1.75
XRRA1-217ENST00000533598 SYNJ2O15056 1496 aa25.97■■□□□ 1.75
XRRA1-217ENST00000533598 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
XRRA1-217ENST00000533598 FBLN2P98095 1184 aa25.94■■□□□ 1.74
XRRA1-217ENST00000533598 IGF1RP08069 1367 aa25.93■■□□□ 1.74
XRRA1-217ENST00000533598 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
XRRA1-217ENST00000533598 CHMP7Q8WUX9 453 aaPredicted RBP25.91■■□□□ 1.74
XRRA1-217ENST00000533598 CUL7Q14999 1698 aa25.88■■□□□ 1.73
XRRA1-217ENST00000533598 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
XRRA1-217ENST00000533598 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
XRRA1-217ENST00000533598 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
XRRA1-217ENST00000533598 EEA1Q15075 1411 aa25.77■■□□□ 1.72
XRRA1-217ENST00000533598 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
XRRA1-217ENST00000533598 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
XRRA1-217ENST00000533598 NUP160Q12769 1436 aa25.71■■□□□ 1.71
XRRA1-217ENST00000533598 CSRNP3Q8WYN3 585 aa25.69■■□□□ 1.7
XRRA1-217ENST00000533598 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
XRRA1-217ENST00000533598 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
XRRA1-217ENST00000533598 PRXQ9BXM0 1461 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms