RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
CDC27-210ENST00000533415 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
CDC27-210ENST00000533415 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
CDC27-210ENST00000533415 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
CDC27-210ENST00000533415 ABCC9O60706 1549 aa25.38■■□□□ 1.65
CDC27-210ENST00000533415 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
CDC27-210ENST00000533415 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
CDC27-210ENST00000533415 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
CDC27-210ENST00000533415 NACADO15069 1562 aa24.5■■□□□ 1.51
CDC27-210ENST00000533415 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.5
CDC27-210ENST00000533415 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
CDC27-210ENST00000533415 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
CDC27-210ENST00000533415 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
CDC27-210ENST00000533415 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
CDC27-210ENST00000533415 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
CDC27-210ENST00000533415 BICRAQ9NZM4 1560 aa23.79■■□□□ 1.4
CDC27-210ENST00000533415 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
CDC27-210ENST00000533415 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.37
CDC27-210ENST00000533415 WIZO95785 1651 aa23.46■■□□□ 1.35
CDC27-210ENST00000533415 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
CDC27-210ENST00000533415 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
CDC27-210ENST00000533415 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
CDC27-210ENST00000533415 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CDC27-210ENST00000533415 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
CDC27-210ENST00000533415 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
CDC27-210ENST00000533415 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
CDC27-210ENST00000533415 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
CDC27-210ENST00000533415 PEG3Q9GZU2 1588 aa22.88■■□□□ 1.25
CDC27-210ENST00000533415 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
CDC27-210ENST00000533415 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
CDC27-210ENST00000533415 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
CDC27-210ENST00000533415 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
CDC27-210ENST00000533415 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
CDC27-210ENST00000533415 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
CDC27-210ENST00000533415 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
CDC27-210ENST00000533415 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
CDC27-210ENST00000533415 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
CDC27-210ENST00000533415 LOC105371045A0A1W2PR82 267 aa22.46■■□□□ 1.19
CDC27-210ENST00000533415 NESP48681 1621 aa22.31■■□□□ 1.16
CDC27-210ENST00000533415 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
CDC27-210ENST00000533415 CFTRP13569 1480 aa22.25■■□□□ 1.15
CDC27-210ENST00000533415 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
CDC27-210ENST00000533415 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
CDC27-210ENST00000533415 SOGA1O94964 1423 aa22.18■■□□□ 1.14
CDC27-210ENST00000533415 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
CDC27-210ENST00000533415 CUX1P39880 1505 aa22.06■■□□□ 1.12
CDC27-210ENST00000533415 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
CDC27-210ENST00000533415 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
CDC27-210ENST00000533415 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
CDC27-210ENST00000533415 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
CDC27-210ENST00000533415 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
CDC27-210ENST00000533415 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
CDC27-210ENST00000533415 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
CDC27-210ENST00000533415 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
CDC27-210ENST00000533415 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
CDC27-210ENST00000533415 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
CDC27-210ENST00000533415 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
CDC27-210ENST00000533415 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
CDC27-210ENST00000533415 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
CDC27-210ENST00000533415 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
CDC27-210ENST00000533415 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
CDC27-210ENST00000533415 CUX2O14529 1486 aa21.73■■□□□ 1.07
CDC27-210ENST00000533415 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
CDC27-210ENST00000533415 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
CDC27-210ENST00000533415 EEA1Q15075 1411 aa21.67■■□□□ 1.06
CDC27-210ENST00000533415 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
CDC27-210ENST00000533415 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
CDC27-210ENST00000533415 KIF27Q86VH2 1401 aa21.64■■□□□ 1.05
CDC27-210ENST00000533415 PPARGC1BQ86YN6 1023 aaKnown RBP21.63■■□□□ 1.05
CDC27-210ENST00000533415 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
CDC27-210ENST00000533415 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
CDC27-210ENST00000533415 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
CDC27-210ENST00000533415 IGF1RP08069 1367 aa21.55■■□□□ 1.04
CDC27-210ENST00000533415 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
CDC27-210ENST00000533415 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
CDC27-210ENST00000533415 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
CDC27-210ENST00000533415 KIF21BO75037 1637 aa21.48■■□□□ 1.03
CDC27-210ENST00000533415 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
CDC27-210ENST00000533415 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
CDC27-210ENST00000533415 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.021e-7■■■■□ 23.9
CDC27-210ENST00000533415 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
CDC27-210ENST00000533415 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
CDC27-210ENST00000533415 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
CDC27-210ENST00000533415 WDR62O43379 1518 aa21.39■■□□□ 1.01
CDC27-210ENST00000533415 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
CDC27-210ENST00000533415 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
CDC27-210ENST00000533415 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
CDC27-210ENST00000533415 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
CDC27-210ENST00000533415 CLIP1P30622 1438 aa21.34■■□□□ 1.01
CDC27-210ENST00000533415 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
CDC27-210ENST00000533415 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
CDC27-210ENST00000533415 P3H3Q8IVL6 736 aa21.29■■□□□ 1
CDC27-210ENST00000533415 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
CDC27-210ENST00000533415 FBLN2P98095 1184 aa21.19■□□□□ 0.98
CDC27-210ENST00000533415 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
CDC27-210ENST00000533415 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
CDC27-210ENST00000533415 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
CDC27-210ENST00000533415 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.97
CDC27-210ENST00000533415 CUL7Q14999 1698 aa21.13■□□□□ 0.97
CDC27-210ENST00000533415 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms