RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
COMMD9-207ENST00000533308 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
COMMD9-207ENST00000533308 ABCC9O60706 1549 aa16.26■□□□□ 0.19
COMMD9-207ENST00000533308 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
COMMD9-207ENST00000533308 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
COMMD9-207ENST00000533308 NACADO15069 1562 aa15.7■□□□□ 0.1
COMMD9-207ENST00000533308 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
COMMD9-207ENST00000533308 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
COMMD9-207ENST00000533308 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
COMMD9-207ENST00000533308 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
COMMD9-207ENST00000533308 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
COMMD9-207ENST00000533308 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
COMMD9-207ENST00000533308 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
COMMD9-207ENST00000533308 SHROOM4Q9ULL8 1493 aa15.19■□□□□ 0.02
COMMD9-207ENST00000533308 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
COMMD9-207ENST00000533308 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
COMMD9-207ENST00000533308 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
COMMD9-207ENST00000533308 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
COMMD9-207ENST00000533308 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
COMMD9-207ENST00000533308 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
COMMD9-207ENST00000533308 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
COMMD9-207ENST00000533308 WIZO95785 1651 aa14.57□□□□□ -0.08
COMMD9-207ENST00000533308 ATAD2BQ9ULI0 1458 aa14.55□□□□□ -0.08
COMMD9-207ENST00000533308 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
COMMD9-207ENST00000533308 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
COMMD9-207ENST00000533308 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
COMMD9-207ENST00000533308 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
COMMD9-207ENST00000533308 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
COMMD9-207ENST00000533308 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
COMMD9-207ENST00000533308 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
COMMD9-207ENST00000533308 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
COMMD9-207ENST00000533308 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
COMMD9-207ENST00000533308 NESP48681 1621 aa14.16□□□□□ -0.14
COMMD9-207ENST00000533308 LAMC3Q9Y6N6 1575 aa14.09□□□□□ -0.15
COMMD9-207ENST00000533308 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
COMMD9-207ENST00000533308 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
COMMD9-207ENST00000533308 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
COMMD9-207ENST00000533308 CFTRP13569 1480 aa14.04□□□□□ -0.16
COMMD9-207ENST00000533308 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
COMMD9-207ENST00000533308 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
COMMD9-207ENST00000533308 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
COMMD9-207ENST00000533308 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
COMMD9-207ENST00000533308 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
COMMD9-207ENST00000533308 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
COMMD9-207ENST00000533308 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
COMMD9-207ENST00000533308 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
COMMD9-207ENST00000533308 WDR62O43379 1518 aa13.81□□□□□ -0.2
COMMD9-207ENST00000533308 CUX1P39880 1505 aa13.77□□□□□ -0.21
COMMD9-207ENST00000533308 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
COMMD9-207ENST00000533308 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
COMMD9-207ENST00000533308 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
COMMD9-207ENST00000533308 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.22
COMMD9-207ENST00000533308 CUX2O14529 1486 aa13.7□□□□□ -0.22
COMMD9-207ENST00000533308 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
COMMD9-207ENST00000533308 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
COMMD9-207ENST00000533308 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
COMMD9-207ENST00000533308 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
COMMD9-207ENST00000533308 TARBP1Q13395 1621 aaKnown RBP13.63□□□□□ -0.23
COMMD9-207ENST00000533308 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
COMMD9-207ENST00000533308 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
COMMD9-207ENST00000533308 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
COMMD9-207ENST00000533308 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
COMMD9-207ENST00000533308 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
COMMD9-207ENST00000533308 SOGA1O94964 1423 aa13.55□□□□□ -0.24
COMMD9-207ENST00000533308 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
COMMD9-207ENST00000533308 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
COMMD9-207ENST00000533308 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
COMMD9-207ENST00000533308 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
COMMD9-207ENST00000533308 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
COMMD9-207ENST00000533308 CHIC1Q5VXU3 224 aa13.46□□□□□ -0.25
COMMD9-207ENST00000533308 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
COMMD9-207ENST00000533308 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
COMMD9-207ENST00000533308 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
COMMD9-207ENST00000533308 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
COMMD9-207ENST00000533308 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
COMMD9-207ENST00000533308 CHD1O14646 1710 aa13.37□□□□□ -0.27
COMMD9-207ENST00000533308 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
COMMD9-207ENST00000533308 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
COMMD9-207ENST00000533308 ERICH3Q5RHP9 1530 aa13.34□□□□□ -0.27
COMMD9-207ENST00000533308 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
COMMD9-207ENST00000533308 CUL7Q14999 1698 aa13.29□□□□□ -0.28
COMMD9-207ENST00000533308 IGF1RP08069 1367 aa13.27□□□□□ -0.29
COMMD9-207ENST00000533308 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
COMMD9-207ENST00000533308 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
COMMD9-207ENST00000533308 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
COMMD9-207ENST00000533308 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
COMMD9-207ENST00000533308 FBLN2P98095 1184 aa13.22□□□□□ -0.29
COMMD9-207ENST00000533308 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
COMMD9-207ENST00000533308 EEA1Q15075 1411 aa13.21□□□□□ -0.3
COMMD9-207ENST00000533308 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
COMMD9-207ENST00000533308 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
COMMD9-207ENST00000533308 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
COMMD9-207ENST00000533308 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
COMMD9-207ENST00000533308 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
COMMD9-207ENST00000533308 NUP160Q12769 1436 aa13.16□□□□□ -0.3
COMMD9-207ENST00000533308 KIF21BO75037 1637 aa13.16□□□□□ -0.3
COMMD9-207ENST00000533308 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
COMMD9-207ENST00000533308 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
COMMD9-207ENST00000533308 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
COMMD9-207ENST00000533308 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms