RNA–Protein interactions for RNA: ENST00000533267.1

SAA3P-201, Transcript of serum amyloid A3, pseudogene, humanhuman

BASIC

Gene SAA3P, Length 365 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAA3P-201ENST00000533267 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
SAA3P-201ENST00000533267 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
SAA3P-201ENST00000533267 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
SAA3P-201ENST00000533267 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
SAA3P-201ENST00000533267 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
SAA3P-201ENST00000533267 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
SAA3P-201ENST00000533267 NACADO15069 1562 aa13.18□□□□□ -0.3
SAA3P-201ENST00000533267 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
SAA3P-201ENST00000533267 ABCC9O60706 1549 aa13.08□□□□□ -0.31
SAA3P-201ENST00000533267 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
SAA3P-201ENST00000533267 RB1CC1Q8TDY2 1594 aa13□□□□□ -0.33
SAA3P-201ENST00000533267 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
SAA3P-201ENST00000533267 SUPT5HO00267 1087 aaKnown RBP12.83□□□□□ -0.36
SAA3P-201ENST00000533267 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
SAA3P-201ENST00000533267 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
SAA3P-201ENST00000533267 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
SAA3P-201ENST00000533267 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
SAA3P-201ENST00000533267 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
SAA3P-201ENST00000533267 SMARCA4P51532 1647 aa12.58□□□□□ -0.4
SAA3P-201ENST00000533267 WIZO95785 1651 aa12.57□□□□□ -0.4
SAA3P-201ENST00000533267 CHIC1Q5VXU3 224 aa12.48□□□□□ -0.41
SAA3P-201ENST00000533267 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
SAA3P-201ENST00000533267 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
SAA3P-201ENST00000533267 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
SAA3P-201ENST00000533267 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
SAA3P-201ENST00000533267 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
SAA3P-201ENST00000533267 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
SAA3P-201ENST00000533267 ATAD2BQ9ULI0 1458 aa12.23□□□□□ -0.45
SAA3P-201ENST00000533267 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
SAA3P-201ENST00000533267 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
SAA3P-201ENST00000533267 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
SAA3P-201ENST00000533267 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
SAA3P-201ENST00000533267 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
SAA3P-201ENST00000533267 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
SAA3P-201ENST00000533267 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
SAA3P-201ENST00000533267 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
SAA3P-201ENST00000533267 SYNJ1O43426 1573 aa11.96□□□□□ -0.5
SAA3P-201ENST00000533267 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
SAA3P-201ENST00000533267 EEA1Q15075 1411 aa11.94□□□□□ -0.5
SAA3P-201ENST00000533267 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
SAA3P-201ENST00000533267 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
SAA3P-201ENST00000533267 CFTRP13569 1480 aa11.89□□□□□ -0.51
SAA3P-201ENST00000533267 KIF21BO75037 1637 aa11.86□□□□□ -0.51
SAA3P-201ENST00000533267 SOGA1O94964 1423 aa11.82□□□□□ -0.52
SAA3P-201ENST00000533267 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
SAA3P-201ENST00000533267 CUX1P39880 1505 aa11.8□□□□□ -0.52
SAA3P-201ENST00000533267 RUSC2Q8N2Y8 1516 aa11.78□□□□□ -0.52
SAA3P-201ENST00000533267 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
SAA3P-201ENST00000533267 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
SAA3P-201ENST00000533267 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
SAA3P-201ENST00000533267 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
SAA3P-201ENST00000533267 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
SAA3P-201ENST00000533267 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.53
SAA3P-201ENST00000533267 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
SAA3P-201ENST00000533267 CEP162Q5TB80 1403 aa11.68□□□□□ -0.54
SAA3P-201ENST00000533267 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
SAA3P-201ENST00000533267 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
SAA3P-201ENST00000533267 PRXQ9BXM0 1461 aa11.63□□□□□ -0.55
SAA3P-201ENST00000533267 WDR97A6NE52 1622 aa11.63□□□□□ -0.55
SAA3P-201ENST00000533267 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
SAA3P-201ENST00000533267 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
SAA3P-201ENST00000533267 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
SAA3P-201ENST00000533267 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
SAA3P-201ENST00000533267 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
SAA3P-201ENST00000533267 PCGF6Q9BYE7 350 aa11.59□□□□□ -0.55
SAA3P-201ENST00000533267 NESP48681 1621 aa11.58□□□□□ -0.56
SAA3P-201ENST00000533267 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
SAA3P-201ENST00000533267 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
SAA3P-201ENST00000533267 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
SAA3P-201ENST00000533267 CUL7Q14999 1698 aa11.54□□□□□ -0.56
SAA3P-201ENST00000533267 CUX2O14529 1486 aa11.53□□□□□ -0.56
SAA3P-201ENST00000533267 CLIP1P30622 1438 aa11.52□□□□□ -0.56
SAA3P-201ENST00000533267 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
SAA3P-201ENST00000533267 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
SAA3P-201ENST00000533267 HRCP23327 699 aa11.52□□□□□ -0.57
SAA3P-201ENST00000533267 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
SAA3P-201ENST00000533267 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
SAA3P-201ENST00000533267 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
SAA3P-201ENST00000533267 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
SAA3P-201ENST00000533267 CTTNBP2Q8WZ74 1663 aa11.49□□□□□ -0.57
SAA3P-201ENST00000533267 IGF1RP08069 1367 aa11.45□□□□□ -0.58
SAA3P-201ENST00000533267 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
SAA3P-201ENST00000533267 ARAP1Q96P48 1450 aa11.44□□□□□ -0.58
SAA3P-201ENST00000533267 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
SAA3P-201ENST00000533267 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
SAA3P-201ENST00000533267 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
SAA3P-201ENST00000533267 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
SAA3P-201ENST00000533267 WDR62O43379 1518 aa11.4□□□□□ -0.59
SAA3P-201ENST00000533267 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
SAA3P-201ENST00000533267 EFCAB5A4FU69 1503 aa11.37□□□□□ -0.59
SAA3P-201ENST00000533267 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
SAA3P-201ENST00000533267 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
SAA3P-201ENST00000533267 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
SAA3P-201ENST00000533267 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
SAA3P-201ENST00000533267 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
SAA3P-201ENST00000533267 ADAMTS12P58397 1594 aa11.33□□□□□ -0.6
SAA3P-201ENST00000533267 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
SAA3P-201ENST00000533267 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
SAA3P-201ENST00000533267 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
SAA3P-201ENST00000533267 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 804.3 ms