RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
PMS2P3-208ENST00000533167 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
PMS2P3-208ENST00000533167 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
PMS2P3-208ENST00000533167 ABCC9O60706 1549 aa16.88■□□□□ 0.29
PMS2P3-208ENST00000533167 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
PMS2P3-208ENST00000533167 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
PMS2P3-208ENST00000533167 NACADO15069 1562 aa16.51■□□□□ 0.23
PMS2P3-208ENST00000533167 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
PMS2P3-208ENST00000533167 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
PMS2P3-208ENST00000533167 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
PMS2P3-208ENST00000533167 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
PMS2P3-208ENST00000533167 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
PMS2P3-208ENST00000533167 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
PMS2P3-208ENST00000533167 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
PMS2P3-208ENST00000533167 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
PMS2P3-208ENST00000533167 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
PMS2P3-208ENST00000533167 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
PMS2P3-208ENST00000533167 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.07
PMS2P3-208ENST00000533167 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
PMS2P3-208ENST00000533167 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
PMS2P3-208ENST00000533167 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
PMS2P3-208ENST00000533167 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
PMS2P3-208ENST00000533167 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
PMS2P3-208ENST00000533167 WIZO95785 1651 aa15.32■□□□□ 0.04
PMS2P3-208ENST00000533167 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
PMS2P3-208ENST00000533167 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
PMS2P3-208ENST00000533167 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
PMS2P3-208ENST00000533167 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
PMS2P3-208ENST00000533167 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
PMS2P3-208ENST00000533167 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
PMS2P3-208ENST00000533167 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
PMS2P3-208ENST00000533167 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
PMS2P3-208ENST00000533167 CFTRP13569 1480 aa14.87□□□□□ -0.03
PMS2P3-208ENST00000533167 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
PMS2P3-208ENST00000533167 NESP48681 1621 aa14.77□□□□□ -0.05
PMS2P3-208ENST00000533167 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
PMS2P3-208ENST00000533167 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
PMS2P3-208ENST00000533167 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
PMS2P3-208ENST00000533167 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
PMS2P3-208ENST00000533167 PRDM2Q13029 1718 aa14.6□□□□□ -0.07
PMS2P3-208ENST00000533167 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
PMS2P3-208ENST00000533167 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
PMS2P3-208ENST00000533167 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
PMS2P3-208ENST00000533167 CUX1P39880 1505 aa14.55□□□□□ -0.08
PMS2P3-208ENST00000533167 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
PMS2P3-208ENST00000533167 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
PMS2P3-208ENST00000533167 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
PMS2P3-208ENST00000533167 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
PMS2P3-208ENST00000533167 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
PMS2P3-208ENST00000533167 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
PMS2P3-208ENST00000533167 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
PMS2P3-208ENST00000533167 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
PMS2P3-208ENST00000533167 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
PMS2P3-208ENST00000533167 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
PMS2P3-208ENST00000533167 WDR62O43379 1518 aa14.43□□□□□ -0.1
PMS2P3-208ENST00000533167 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
PMS2P3-208ENST00000533167 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
PMS2P3-208ENST00000533167 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
PMS2P3-208ENST00000533167 CUX2O14529 1486 aa14.36□□□□□ -0.11
PMS2P3-208ENST00000533167 SOGA1O94964 1423 aa14.33□□□□□ -0.11
PMS2P3-208ENST00000533167 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
PMS2P3-208ENST00000533167 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
PMS2P3-208ENST00000533167 RUSC2Q8N2Y8 1516 aa14.3□□□□□ -0.12
PMS2P3-208ENST00000533167 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
PMS2P3-208ENST00000533167 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
PMS2P3-208ENST00000533167 EEA1Q15075 1411 aa14.24□□□□□ -0.13
PMS2P3-208ENST00000533167 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
PMS2P3-208ENST00000533167 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
PMS2P3-208ENST00000533167 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
PMS2P3-208ENST00000533167 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
PMS2P3-208ENST00000533167 IGF1RP08069 1367 aa14.19□□□□□ -0.14
PMS2P3-208ENST00000533167 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
PMS2P3-208ENST00000533167 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
PMS2P3-208ENST00000533167 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■■■■■ 33.7
PMS2P3-208ENST00000533167 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
PMS2P3-208ENST00000533167 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
PMS2P3-208ENST00000533167 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
PMS2P3-208ENST00000533167 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
PMS2P3-208ENST00000533167 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
PMS2P3-208ENST00000533167 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
PMS2P3-208ENST00000533167 CARMIL1Q5VZK9 1371 aa14.06□□□□□ -0.16
PMS2P3-208ENST00000533167 KIF21BO75037 1637 aa14.04□□□□□ -0.16
PMS2P3-208ENST00000533167 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
PMS2P3-208ENST00000533167 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
PMS2P3-208ENST00000533167 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
PMS2P3-208ENST00000533167 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
PMS2P3-208ENST00000533167 ADAMTS12P58397 1594 aa14□□□□□ -0.17
PMS2P3-208ENST00000533167 MAGI1Q96QZ7 1491 aaPredicted RBP14□□□□□ -0.17
PMS2P3-208ENST00000533167 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
PMS2P3-208ENST00000533167 CUL7Q14999 1698 aa13.99□□□□□ -0.17
PMS2P3-208ENST00000533167 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
PMS2P3-208ENST00000533167 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
PMS2P3-208ENST00000533167 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
PMS2P3-208ENST00000533167 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
PMS2P3-208ENST00000533167 NUP160Q12769 1436 aa13.9□□□□□ -0.19
PMS2P3-208ENST00000533167 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
PMS2P3-208ENST00000533167 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
PMS2P3-208ENST00000533167 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
PMS2P3-208ENST00000533167 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
PMS2P3-208ENST00000533167 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms