RNA–Protein interactions for RNA: ENST00000532858.5

SAA1-203, Transcript of serum amyloid A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAA1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1-203ENST00000532858 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
SAA1-203ENST00000532858 ABCC9O60706 1549 aa18.51■□□□□ 0.55
SAA1-203ENST00000532858 CCDC180Q9P1Z9 1646 aa18.48■□□□□ 0.55
SAA1-203ENST00000532858 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
SAA1-203ENST00000532858 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
SAA1-203ENST00000532858 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
SAA1-203ENST00000532858 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
SAA1-203ENST00000532858 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
SAA1-203ENST00000532858 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
SAA1-203ENST00000532858 NACADO15069 1562 aa17.28■□□□□ 0.36
SAA1-203ENST00000532858 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
SAA1-203ENST00000532858 UNC13AQ9UPW8 1703 aa16.97■□□□□ 0.31
SAA1-203ENST00000532858 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
SAA1-203ENST00000532858 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
SAA1-203ENST00000532858 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
SAA1-203ENST00000532858 SCRIBQ14160 1630 aa16.77■□□□□ 0.27
SAA1-203ENST00000532858 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
SAA1-203ENST00000532858 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
SAA1-203ENST00000532858 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
SAA1-203ENST00000532858 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
SAA1-203ENST00000532858 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
SAA1-203ENST00000532858 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
SAA1-203ENST00000532858 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
SAA1-203ENST00000532858 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
SAA1-203ENST00000532858 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
SAA1-203ENST00000532858 WIZO95785 1651 aa16.04■□□□□ 0.16
SAA1-203ENST00000532858 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
SAA1-203ENST00000532858 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
SAA1-203ENST00000532858 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
SAA1-203ENST00000532858 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
SAA1-203ENST00000532858 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
SAA1-203ENST00000532858 CUX2O14529 1486 aa15.94■□□□□ 0.14
SAA1-203ENST00000532858 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
SAA1-203ENST00000532858 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
SAA1-203ENST00000532858 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
SAA1-203ENST00000532858 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
SAA1-203ENST00000532858 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
SAA1-203ENST00000532858 NESP48681 1621 aa15.83■□□□□ 0.12
SAA1-203ENST00000532858 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
SAA1-203ENST00000532858 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
SAA1-203ENST00000532858 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
SAA1-203ENST00000532858 CFTRP13569 1480 aa15.56■□□□□ 0.08
SAA1-203ENST00000532858 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
SAA1-203ENST00000532858 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
SAA1-203ENST00000532858 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
SAA1-203ENST00000532858 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
SAA1-203ENST00000532858 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
SAA1-203ENST00000532858 WDR62O43379 1518 aa15.39■□□□□ 0.05
SAA1-203ENST00000532858 EEA1Q15075 1411 aa15.39■□□□□ 0.05
SAA1-203ENST00000532858 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
SAA1-203ENST00000532858 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
SAA1-203ENST00000532858 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
SAA1-203ENST00000532858 TOP2BQ02880 1626 aa15.31■□□□□ 0.04
SAA1-203ENST00000532858 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SAA1-203ENST00000532858 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
SAA1-203ENST00000532858 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
SAA1-203ENST00000532858 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
SAA1-203ENST00000532858 CUX1P39880 1505 aa15.21■□□□□ 0.03
SAA1-203ENST00000532858 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
SAA1-203ENST00000532858 SOGA1O94964 1423 aa15.16■□□□□ 0.02
SAA1-203ENST00000532858 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
SAA1-203ENST00000532858 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
SAA1-203ENST00000532858 LOC105371045A0A1W2PR82 267 aa15.11■□□□□ 0.01
SAA1-203ENST00000532858 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
SAA1-203ENST00000532858 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
SAA1-203ENST00000532858 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0.01
SAA1-203ENST00000532858 IFT140Q96RY7 1462 aa15.08■□□□□ 0
SAA1-203ENST00000532858 TOPBP1Q92547 1522 aa15.07■□□□□ 0
SAA1-203ENST00000532858 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
SAA1-203ENST00000532858 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
SAA1-203ENST00000532858 GOLGA3Q08378 1498 aa15.04■□□□□ -0
SAA1-203ENST00000532858 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
SAA1-203ENST00000532858 KIF21BO75037 1637 aa15.03■□□□□ -0
SAA1-203ENST00000532858 RIMBP3CA6NJZ7 1639 aa15.02□□□□□ -0.01
SAA1-203ENST00000532858 RIMBP3BA6NNM3 1639 aa15.02□□□□□ -0.01
SAA1-203ENST00000532858 RIMBP3Q9UFD9 1639 aa15.02□□□□□ -0.01
SAA1-203ENST00000532858 ABCA10Q8WWZ4 1543 aa15.02□□□□□ -0.01
SAA1-203ENST00000532858 FBLN2P98095 1184 aa15.01□□□□□ -0.01
SAA1-203ENST00000532858 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
SAA1-203ENST00000532858 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
SAA1-203ENST00000532858 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
SAA1-203ENST00000532858 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
SAA1-203ENST00000532858 ARHGEF11O15085 1522 aa14.97□□□□□ -0.01
SAA1-203ENST00000532858 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.01
SAA1-203ENST00000532858 IGF1RP08069 1367 aa14.95□□□□□ -0.02
SAA1-203ENST00000532858 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
SAA1-203ENST00000532858 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
SAA1-203ENST00000532858 WDR97A6NE52 1622 aa14.9□□□□□ -0.02
SAA1-203ENST00000532858 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
SAA1-203ENST00000532858 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
SAA1-203ENST00000532858 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
SAA1-203ENST00000532858 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
SAA1-203ENST00000532858 TDRD9Q8NDG6 1382 aaKnown RBP14.86□□□□□ -0.03
SAA1-203ENST00000532858 CHD1O14646 1710 aa14.85□□□□□ -0.03
SAA1-203ENST00000532858 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
SAA1-203ENST00000532858 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
SAA1-203ENST00000532858 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
SAA1-203ENST00000532858 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
SAA1-203ENST00000532858 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
SAA1-203ENST00000532858 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms