RNA–Protein interactions for RNA: ENST00000532840.5

C11orf49-219, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-219ENST00000532840 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
C11orf49-219ENST00000532840 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
C11orf49-219ENST00000532840 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
C11orf49-219ENST00000532840 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
C11orf49-219ENST00000532840 ABCC9O60706 1549 aa18.44■□□□□ 0.54
C11orf49-219ENST00000532840 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
C11orf49-219ENST00000532840 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
C11orf49-219ENST00000532840 NACADO15069 1562 aa17.72■□□□□ 0.43
C11orf49-219ENST00000532840 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
C11orf49-219ENST00000532840 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
C11orf49-219ENST00000532840 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
C11orf49-219ENST00000532840 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
C11orf49-219ENST00000532840 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
C11orf49-219ENST00000532840 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
C11orf49-219ENST00000532840 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
C11orf49-219ENST00000532840 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
C11orf49-219ENST00000532840 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
C11orf49-219ENST00000532840 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
C11orf49-219ENST00000532840 CECR2Q9BXF3 1484 aa16.71■□□□□ 0.27
C11orf49-219ENST00000532840 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
C11orf49-219ENST00000532840 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
C11orf49-219ENST00000532840 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
C11orf49-219ENST00000532840 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
C11orf49-219ENST00000532840 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
C11orf49-219ENST00000532840 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
C11orf49-219ENST00000532840 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
C11orf49-219ENST00000532840 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
C11orf49-219ENST00000532840 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
C11orf49-219ENST00000532840 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
C11orf49-219ENST00000532840 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
C11orf49-219ENST00000532840 WIZO95785 1651 aa16.3■□□□□ 0.2
C11orf49-219ENST00000532840 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
C11orf49-219ENST00000532840 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
C11orf49-219ENST00000532840 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
C11orf49-219ENST00000532840 NESP48681 1621 aa16.03■□□□□ 0.16
C11orf49-219ENST00000532840 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
C11orf49-219ENST00000532840 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
C11orf49-219ENST00000532840 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
C11orf49-219ENST00000532840 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
C11orf49-219ENST00000532840 CFTRP13569 1480 aa15.87■□□□□ 0.13
C11orf49-219ENST00000532840 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
C11orf49-219ENST00000532840 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
C11orf49-219ENST00000532840 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
C11orf49-219ENST00000532840 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
C11orf49-219ENST00000532840 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
C11orf49-219ENST00000532840 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
C11orf49-219ENST00000532840 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
C11orf49-219ENST00000532840 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
C11orf49-219ENST00000532840 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
C11orf49-219ENST00000532840 CUX2O14529 1486 aa15.6■□□□□ 0.09
C11orf49-219ENST00000532840 WDR62O43379 1518 aa15.6■□□□□ 0.09
C11orf49-219ENST00000532840 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
C11orf49-219ENST00000532840 CUX1P39880 1505 aa15.46■□□□□ 0.07
C11orf49-219ENST00000532840 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
C11orf49-219ENST00000532840 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
C11orf49-219ENST00000532840 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
C11orf49-219ENST00000532840 RAD54L2Q9Y4B4 1467 aa15.36■□□□□ 0.05
C11orf49-219ENST00000532840 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
C11orf49-219ENST00000532840 ZNF608Q9ULD9 1512 aaPredicted RBP15.35■□□□□ 0.05
C11orf49-219ENST00000532840 FOXD1Q16676 465 aa15.35■□□□□ 0.05
C11orf49-219ENST00000532840 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
C11orf49-219ENST00000532840 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
C11orf49-219ENST00000532840 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
C11orf49-219ENST00000532840 IFT140Q96RY7 1462 aa15.33■□□□□ 0.05
C11orf49-219ENST00000532840 SOGA1O94964 1423 aa15.31■□□□□ 0.04
C11orf49-219ENST00000532840 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
C11orf49-219ENST00000532840 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
C11orf49-219ENST00000532840 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
C11orf49-219ENST00000532840 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
C11orf49-219ENST00000532840 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
C11orf49-219ENST00000532840 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
C11orf49-219ENST00000532840 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
C11orf49-219ENST00000532840 ABCA10Q8WWZ4 1543 aa15.21■□□□□ 0.03
C11orf49-219ENST00000532840 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
C11orf49-219ENST00000532840 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
C11orf49-219ENST00000532840 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
C11orf49-219ENST00000532840 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
C11orf49-219ENST00000532840 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0
C11orf49-219ENST00000532840 PBRM1Q86U86 1689 aa15.04■□□□□ -0
C11orf49-219ENST00000532840 TRIM41Q8WV44 630 aa15.04■□□□□ -0
C11orf49-219ENST00000532840 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
C11orf49-219ENST00000532840 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
C11orf49-219ENST00000532840 IGF1RP08069 1367 aa15.02■□□□□ -0
C11orf49-219ENST00000532840 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
C11orf49-219ENST00000532840 CHD1O14646 1710 aa15□□□□□ -0.01
C11orf49-219ENST00000532840 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
C11orf49-219ENST00000532840 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
C11orf49-219ENST00000532840 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
C11orf49-219ENST00000532840 FBLN2P98095 1184 aa14.98□□□□□ -0.01
C11orf49-219ENST00000532840 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
C11orf49-219ENST00000532840 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
C11orf49-219ENST00000532840 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
C11orf49-219ENST00000532840 GRIN2AQ12879 1464 aa14.91□□□□□ -0.02
C11orf49-219ENST00000532840 CARMIL1Q5VZK9 1371 aa14.88□□□□□ -0.03
C11orf49-219ENST00000532840 NUP160Q12769 1436 aa14.88□□□□□ -0.03
C11orf49-219ENST00000532840 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
C11orf49-219ENST00000532840 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
C11orf49-219ENST00000532840 CUL7Q14999 1698 aa14.83□□□□□ -0.04
C11orf49-219ENST00000532840 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
C11orf49-219ENST00000532840 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms