RNA–Protein interactions for RNA: ENST00000532705.1

COMMD9-206, Transcript of COMM domain containing 9, humanhuman

TSL 2 BASIC

Gene COMMD9, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-206ENST00000532705 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
COMMD9-206ENST00000532705 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
COMMD9-206ENST00000532705 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
COMMD9-206ENST00000532705 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
COMMD9-206ENST00000532705 ABCC9O60706 1549 aa21.19■□□□□ 0.98
COMMD9-206ENST00000532705 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
COMMD9-206ENST00000532705 NACADO15069 1562 aa20.54■□□□□ 0.88
COMMD9-206ENST00000532705 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
COMMD9-206ENST00000532705 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
COMMD9-206ENST00000532705 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
COMMD9-206ENST00000532705 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
COMMD9-206ENST00000532705 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
COMMD9-206ENST00000532705 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
COMMD9-206ENST00000532705 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
COMMD9-206ENST00000532705 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
COMMD9-206ENST00000532705 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
COMMD9-206ENST00000532705 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
COMMD9-206ENST00000532705 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
COMMD9-206ENST00000532705 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
COMMD9-206ENST00000532705 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
COMMD9-206ENST00000532705 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
COMMD9-206ENST00000532705 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
COMMD9-206ENST00000532705 BAZ1AQ9NRL2 1556 aaPredicted RBP19.07■□□□□ 0.64
COMMD9-206ENST00000532705 SMARCA4P51532 1647 aa19■□□□□ 0.63
COMMD9-206ENST00000532705 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
COMMD9-206ENST00000532705 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
COMMD9-206ENST00000532705 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
COMMD9-206ENST00000532705 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
COMMD9-206ENST00000532705 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
COMMD9-206ENST00000532705 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
COMMD9-206ENST00000532705 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
COMMD9-206ENST00000532705 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
COMMD9-206ENST00000532705 WIZO95785 1651 aa18.65■□□□□ 0.58
COMMD9-206ENST00000532705 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
COMMD9-206ENST00000532705 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
COMMD9-206ENST00000532705 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
COMMD9-206ENST00000532705 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
COMMD9-206ENST00000532705 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
COMMD9-206ENST00000532705 FOXD1Q16676 465 aa18.35■□□□□ 0.53
COMMD9-206ENST00000532705 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
COMMD9-206ENST00000532705 NESP48681 1621 aa18.33■□□□□ 0.52
COMMD9-206ENST00000532705 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
COMMD9-206ENST00000532705 CFTRP13569 1480 aa18.29■□□□□ 0.52
COMMD9-206ENST00000532705 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
COMMD9-206ENST00000532705 CUX2O14529 1486 aa18.14■□□□□ 0.5
COMMD9-206ENST00000532705 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
COMMD9-206ENST00000532705 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
COMMD9-206ENST00000532705 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
COMMD9-206ENST00000532705 PRDM2Q13029 1718 aa18.08■□□□□ 0.48
COMMD9-206ENST00000532705 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
COMMD9-206ENST00000532705 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
COMMD9-206ENST00000532705 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
COMMD9-206ENST00000532705 WDR62O43379 1518 aa17.98■□□□□ 0.47
COMMD9-206ENST00000532705 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
COMMD9-206ENST00000532705 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
COMMD9-206ENST00000532705 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
COMMD9-206ENST00000532705 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
COMMD9-206ENST00000532705 CUX1P39880 1505 aa17.71■□□□□ 0.43
COMMD9-206ENST00000532705 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
COMMD9-206ENST00000532705 SOGA1O94964 1423 aa17.7■□□□□ 0.42
COMMD9-206ENST00000532705 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
COMMD9-206ENST00000532705 FGD5Q6ZNL6 1462 aa17.66■□□□□ 0.42
COMMD9-206ENST00000532705 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
COMMD9-206ENST00000532705 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
COMMD9-206ENST00000532705 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
COMMD9-206ENST00000532705 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
COMMD9-206ENST00000532705 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.41
COMMD9-206ENST00000532705 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
COMMD9-206ENST00000532705 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
COMMD9-206ENST00000532705 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
COMMD9-206ENST00000532705 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
COMMD9-206ENST00000532705 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
COMMD9-206ENST00000532705 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
COMMD9-206ENST00000532705 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
COMMD9-206ENST00000532705 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
COMMD9-206ENST00000532705 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
COMMD9-206ENST00000532705 GAPVD1Q14C86 1478 aa17.47■□□□□ 0.39
COMMD9-206ENST00000532705 MAGI1Q96QZ7 1491 aaPredicted RBP17.43■□□□□ 0.38
COMMD9-206ENST00000532705 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
COMMD9-206ENST00000532705 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
COMMD9-206ENST00000532705 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
COMMD9-206ENST00000532705 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
COMMD9-206ENST00000532705 ADRA2BP18089 450 aa17.38■□□□□ 0.37
COMMD9-206ENST00000532705 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
COMMD9-206ENST00000532705 FBLN2P98095 1184 aa17.37■□□□□ 0.37
COMMD9-206ENST00000532705 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
COMMD9-206ENST00000532705 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
COMMD9-206ENST00000532705 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
COMMD9-206ENST00000532705 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
COMMD9-206ENST00000532705 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
COMMD9-206ENST00000532705 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
COMMD9-206ENST00000532705 IGF1RP08069 1367 aa17.27■□□□□ 0.35
COMMD9-206ENST00000532705 CHD1O14646 1710 aa17.24■□□□□ 0.35
COMMD9-206ENST00000532705 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
COMMD9-206ENST00000532705 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
COMMD9-206ENST00000532705 CUL7Q14999 1698 aa17.19■□□□□ 0.34
COMMD9-206ENST00000532705 CARMIL1Q5VZK9 1371 aa17.18■□□□□ 0.34
COMMD9-206ENST00000532705 EEA1Q15075 1411 aa17.15■□□□□ 0.34
COMMD9-206ENST00000532705 NUP160Q12769 1436 aa17.14■□□□□ 0.33
COMMD9-206ENST00000532705 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms