RNA–Protein interactions for RNA: ENST00000532650.1

SPTBN2-207, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 2

Gene SPTBN2, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-207ENST00000532650 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
SPTBN2-207ENST00000532650 ABCC9O60706 1549 aa27.97■■■□□ 2.07
SPTBN2-207ENST00000532650 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
SPTBN2-207ENST00000532650 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
SPTBN2-207ENST00000532650 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
SPTBN2-207ENST00000532650 NACADO15069 1562 aa26.06■■□□□ 1.76
SPTBN2-207ENST00000532650 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
SPTBN2-207ENST00000532650 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
SPTBN2-207ENST00000532650 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
SPTBN2-207ENST00000532650 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
SPTBN2-207ENST00000532650 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
SPTBN2-207ENST00000532650 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
SPTBN2-207ENST00000532650 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
SPTBN2-207ENST00000532650 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
SPTBN2-207ENST00000532650 EIF4G1Q04637 1599 aaKnown RBP25.08■■□□□ 1.61
SPTBN2-207ENST00000532650 DNAJC5Q9H3Z4 198 aa25.07■■□□□ 1.6
SPTBN2-207ENST00000532650 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
SPTBN2-207ENST00000532650 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
SPTBN2-207ENST00000532650 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
SPTBN2-207ENST00000532650 CUX2O14529 1486 aa24.43■■□□□ 1.5
SPTBN2-207ENST00000532650 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
SPTBN2-207ENST00000532650 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
SPTBN2-207ENST00000532650 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
SPTBN2-207ENST00000532650 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
SPTBN2-207ENST00000532650 NESP48681 1621 aa23.86■■□□□ 1.41
SPTBN2-207ENST00000532650 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
SPTBN2-207ENST00000532650 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
SPTBN2-207ENST00000532650 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
SPTBN2-207ENST00000532650 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
SPTBN2-207ENST00000532650 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
SPTBN2-207ENST00000532650 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
SPTBN2-207ENST00000532650 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
SPTBN2-207ENST00000532650 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
SPTBN2-207ENST00000532650 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
SPTBN2-207ENST00000532650 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
SPTBN2-207ENST00000532650 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
SPTBN2-207ENST00000532650 WDR62O43379 1518 aa23.33■■□□□ 1.33
SPTBN2-207ENST00000532650 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
SPTBN2-207ENST00000532650 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.31
SPTBN2-207ENST00000532650 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
SPTBN2-207ENST00000532650 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
SPTBN2-207ENST00000532650 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
SPTBN2-207ENST00000532650 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
SPTBN2-207ENST00000532650 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
SPTBN2-207ENST00000532650 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
SPTBN2-207ENST00000532650 WIZO95785 1651 aa22.94■■□□□ 1.26
SPTBN2-207ENST00000532650 CFTRP13569 1480 aa22.91■■□□□ 1.26
SPTBN2-207ENST00000532650 URB2Q14146 1524 aaKnown RBP22.88■■□□□ 1.25
SPTBN2-207ENST00000532650 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
SPTBN2-207ENST00000532650 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
SPTBN2-207ENST00000532650 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
SPTBN2-207ENST00000532650 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
SPTBN2-207ENST00000532650 PRDM2Q13029 1718 aa22.64■■□□□ 1.21
SPTBN2-207ENST00000532650 CYB5RLQ6IPT4 315 aa22.58■■□□□ 1.21
SPTBN2-207ENST00000532650 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
SPTBN2-207ENST00000532650 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
SPTBN2-207ENST00000532650 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
SPTBN2-207ENST00000532650 TOPBP1Q92547 1522 aa22.52■■□□□ 1.19
SPTBN2-207ENST00000532650 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
SPTBN2-207ENST00000532650 CHD1O14646 1710 aa22.5■■□□□ 1.19
SPTBN2-207ENST00000532650 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
SPTBN2-207ENST00000532650 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
SPTBN2-207ENST00000532650 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.18
SPTBN2-207ENST00000532650 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
SPTBN2-207ENST00000532650 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SPTBN2-207ENST00000532650 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
SPTBN2-207ENST00000532650 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
SPTBN2-207ENST00000532650 FBLN2P98095 1184 aa22.26■■□□□ 1.15
SPTBN2-207ENST00000532650 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
SPTBN2-207ENST00000532650 SNAPC4Q5SXM2 1469 aa22.16■■□□□ 1.14
SPTBN2-207ENST00000532650 WDR97A6NE52 1622 aa22.16■■□□□ 1.14
SPTBN2-207ENST00000532650 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
SPTBN2-207ENST00000532650 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
SPTBN2-207ENST00000532650 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
SPTBN2-207ENST00000532650 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
SPTBN2-207ENST00000532650 SOGA1O94964 1423 aa22.08■■□□□ 1.13
SPTBN2-207ENST00000532650 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
SPTBN2-207ENST00000532650 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
SPTBN2-207ENST00000532650 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
SPTBN2-207ENST00000532650 GRIN2BQ13224 1484 aa22.01■■□□□ 1.11
SPTBN2-207ENST00000532650 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
SPTBN2-207ENST00000532650 CUX1P39880 1505 aa21.9■■□□□ 1.1
SPTBN2-207ENST00000532650 PBRM1Q86U86 1689 aa21.89■■□□□ 1.1
SPTBN2-207ENST00000532650 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
SPTBN2-207ENST00000532650 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
SPTBN2-207ENST00000532650 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
SPTBN2-207ENST00000532650 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
SPTBN2-207ENST00000532650 KIF13AQ9H1H9 1805 aa21.74■■□□□ 1.07
SPTBN2-207ENST00000532650 GRIN2AQ12879 1464 aa21.74■■□□□ 1.07
SPTBN2-207ENST00000532650 NUP160Q12769 1436 aa21.71■■□□□ 1.07
SPTBN2-207ENST00000532650 SHROOM2Q13796 1616 aa21.7■■□□□ 1.06
SPTBN2-207ENST00000532650 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
SPTBN2-207ENST00000532650 ABCC10Q5T3U5 1492 aa21.54■■□□□ 1.04
SPTBN2-207ENST00000532650 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
SPTBN2-207ENST00000532650 MAPKBP1O60336 1514 aa21.5■■□□□ 1.03
SPTBN2-207ENST00000532650 DIP2BQ9P265 1576 aa21.49■■□□□ 1.03
SPTBN2-207ENST00000532650 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
SPTBN2-207ENST00000532650 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
SPTBN2-207ENST00000532650 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
SPTBN2-207ENST00000532650 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms