RNA–Protein interactions for RNA: ENST00000532547.1

PKD2L1-204, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2L1, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-204ENST00000532547 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
PKD2L1-204ENST00000532547 ABCC9O60706 1549 aa30.88■■■□□ 2.53
PKD2L1-204ENST00000532547 CCDC180Q9P1Z9 1646 aa29.9■■■□□ 2.38
PKD2L1-204ENST00000532547 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
PKD2L1-204ENST00000532547 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
PKD2L1-204ENST00000532547 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
PKD2L1-204ENST00000532547 NACADO15069 1562 aa28.54■■■□□ 2.16
PKD2L1-204ENST00000532547 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
PKD2L1-204ENST00000532547 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.11
PKD2L1-204ENST00000532547 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
PKD2L1-204ENST00000532547 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
PKD2L1-204ENST00000532547 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
PKD2L1-204ENST00000532547 MYO15BQ96JP2 1530 aa27.85■■■□□ 2.05
PKD2L1-204ENST00000532547 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
PKD2L1-204ENST00000532547 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
PKD2L1-204ENST00000532547 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
PKD2L1-204ENST00000532547 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
PKD2L1-204ENST00000532547 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
PKD2L1-204ENST00000532547 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
PKD2L1-204ENST00000532547 CUX2O14529 1486 aa26.86■■□□□ 1.89
PKD2L1-204ENST00000532547 ERCC6Q03468 1493 aa26.67■■□□□ 1.86
PKD2L1-204ENST00000532547 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
PKD2L1-204ENST00000532547 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
PKD2L1-204ENST00000532547 NESP48681 1621 aa26.32■■□□□ 1.8
PKD2L1-204ENST00000532547 ATAD2BQ9ULI0 1458 aa26.24■■□□□ 1.79
PKD2L1-204ENST00000532547 THOC2Q8NI27 1593 aaKnown RBP26.11■■□□□ 1.77
PKD2L1-204ENST00000532547 HMGXB3Q12766 1538 aa26.08■■□□□ 1.77
PKD2L1-204ENST00000532547 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
PKD2L1-204ENST00000532547 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
PKD2L1-204ENST00000532547 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
PKD2L1-204ENST00000532547 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
PKD2L1-204ENST00000532547 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
PKD2L1-204ENST00000532547 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
PKD2L1-204ENST00000532547 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
PKD2L1-204ENST00000532547 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
PKD2L1-204ENST00000532547 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
PKD2L1-204ENST00000532547 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
PKD2L1-204ENST00000532547 WDR62O43379 1518 aa25.58■■□□□ 1.69
PKD2L1-204ENST00000532547 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
PKD2L1-204ENST00000532547 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
PKD2L1-204ENST00000532547 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
PKD2L1-204ENST00000532547 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
PKD2L1-204ENST00000532547 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
PKD2L1-204ENST00000532547 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
PKD2L1-204ENST00000532547 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
PKD2L1-204ENST00000532547 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
PKD2L1-204ENST00000532547 WIZO95785 1651 aa25.14■■□□□ 1.62
PKD2L1-204ENST00000532547 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
PKD2L1-204ENST00000532547 CFTRP13569 1480 aa25.12■■□□□ 1.61
PKD2L1-204ENST00000532547 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
PKD2L1-204ENST00000532547 TRHP20396 242 aaPredicted RBP25.04■■□□□ 1.6
PKD2L1-204ENST00000532547 ZNF608Q9ULD9 1512 aaPredicted RBP25.01■■□□□ 1.59
PKD2L1-204ENST00000532547 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
PKD2L1-204ENST00000532547 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
PKD2L1-204ENST00000532547 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
PKD2L1-204ENST00000532547 RSF1Q96T23 1441 aaPredicted RBP24.76■■□□□ 1.55
PKD2L1-204ENST00000532547 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
PKD2L1-204ENST00000532547 EIF4G3O43432 1585 aaKnown RBP24.72■■□□□ 1.55
PKD2L1-204ENST00000532547 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
PKD2L1-204ENST00000532547 FBLN2P98095 1184 aa24.69■■□□□ 1.54
PKD2L1-204ENST00000532547 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.54
PKD2L1-204ENST00000532547 CHD1O14646 1710 aa24.68■■□□□ 1.54
PKD2L1-204ENST00000532547 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
PKD2L1-204ENST00000532547 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
PKD2L1-204ENST00000532547 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
PKD2L1-204ENST00000532547 ABCC8Q09428 1581 aa24.53■■□□□ 1.52
PKD2L1-204ENST00000532547 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
PKD2L1-204ENST00000532547 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
PKD2L1-204ENST00000532547 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
PKD2L1-204ENST00000532547 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
PKD2L1-204ENST00000532547 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
PKD2L1-204ENST00000532547 SNAPC4Q5SXM2 1469 aa24.36■■□□□ 1.49
PKD2L1-204ENST00000532547 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
PKD2L1-204ENST00000532547 SOGA1O94964 1423 aa24.31■■□□□ 1.48
PKD2L1-204ENST00000532547 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
PKD2L1-204ENST00000532547 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
PKD2L1-204ENST00000532547 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
PKD2L1-204ENST00000532547 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
PKD2L1-204ENST00000532547 GRIN2BQ13224 1484 aa24.15■■□□□ 1.46
PKD2L1-204ENST00000532547 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
PKD2L1-204ENST00000532547 WDR97A6NE52 1622 aa24.12■■□□□ 1.45
PKD2L1-204ENST00000532547 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
PKD2L1-204ENST00000532547 CUX1P39880 1505 aa24.02■■□□□ 1.44
PKD2L1-204ENST00000532547 ILDR1Q86SU0 546 aaPredicted RBP23.96■■□□□ 1.43
PKD2L1-204ENST00000532547 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
PKD2L1-204ENST00000532547 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
PKD2L1-204ENST00000532547 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
PKD2L1-204ENST00000532547 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
PKD2L1-204ENST00000532547 KDM4FA0A1W2PPD8 638 aa23.86■■□□□ 1.41
PKD2L1-204ENST00000532547 GRIN2AQ12879 1464 aa23.85■■□□□ 1.41
PKD2L1-204ENST00000532547 NUP160Q12769 1436 aa23.82■■□□□ 1.4
PKD2L1-204ENST00000532547 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
PKD2L1-204ENST00000532547 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
PKD2L1-204ENST00000532547 FAM69CQ0P6D2 419 aa23.78■■□□□ 1.4
PKD2L1-204ENST00000532547 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
PKD2L1-204ENST00000532547 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
PKD2L1-204ENST00000532547 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
PKD2L1-204ENST00000532547 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
PKD2L1-204ENST00000532547 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
PKD2L1-204ENST00000532547 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms