RNA–Protein interactions for RNA: ENST00000532536.5

SHARPIN-206, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-206ENST00000532536 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
SHARPIN-206ENST00000532536 ABCC9O60706 1549 aa16.27■□□□□ 0.2
SHARPIN-206ENST00000532536 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
SHARPIN-206ENST00000532536 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
SHARPIN-206ENST00000532536 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
SHARPIN-206ENST00000532536 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
SHARPIN-206ENST00000532536 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
SHARPIN-206ENST00000532536 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHARPIN-206ENST00000532536 NACADO15069 1562 aa14.93□□□□□ -0.02
SHARPIN-206ENST00000532536 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
SHARPIN-206ENST00000532536 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.04
SHARPIN-206ENST00000532536 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
SHARPIN-206ENST00000532536 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
SHARPIN-206ENST00000532536 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
SHARPIN-206ENST00000532536 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
SHARPIN-206ENST00000532536 CUX2O14529 1486 aa14.45□□□□□ -0.1
SHARPIN-206ENST00000532536 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
SHARPIN-206ENST00000532536 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
SHARPIN-206ENST00000532536 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
SHARPIN-206ENST00000532536 SCRIBQ14160 1630 aa14.08□□□□□ -0.16
SHARPIN-206ENST00000532536 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
SHARPIN-206ENST00000532536 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
SHARPIN-206ENST00000532536 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
SHARPIN-206ENST00000532536 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
SHARPIN-206ENST00000532536 NESP48681 1621 aa13.75□□□□□ -0.21
SHARPIN-206ENST00000532536 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
SHARPIN-206ENST00000532536 KIF21AQ7Z4S6 1674 aa13.64□□□□□ -0.23
SHARPIN-206ENST00000532536 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
SHARPIN-206ENST00000532536 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
SHARPIN-206ENST00000532536 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
SHARPIN-206ENST00000532536 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
SHARPIN-206ENST00000532536 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
SHARPIN-206ENST00000532536 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
SHARPIN-206ENST00000532536 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
SHARPIN-206ENST00000532536 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
SHARPIN-206ENST00000532536 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
SHARPIN-206ENST00000532536 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
SHARPIN-206ENST00000532536 WDR62O43379 1518 aa13.49□□□□□ -0.25
SHARPIN-206ENST00000532536 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
SHARPIN-206ENST00000532536 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
SHARPIN-206ENST00000532536 SMARCA4P51532 1647 aa13.4□□□□□ -0.26
SHARPIN-206ENST00000532536 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
SHARPIN-206ENST00000532536 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
SHARPIN-206ENST00000532536 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
SHARPIN-206ENST00000532536 CADPSQ9ULU8 1353 aa13.26□□□□□ -0.29
SHARPIN-206ENST00000532536 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
SHARPIN-206ENST00000532536 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
SHARPIN-206ENST00000532536 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
SHARPIN-206ENST00000532536 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
SHARPIN-206ENST00000532536 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
SHARPIN-206ENST00000532536 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
SHARPIN-206ENST00000532536 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
SHARPIN-206ENST00000532536 CHD1O14646 1710 aa13.05□□□□□ -0.32
SHARPIN-206ENST00000532536 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
SHARPIN-206ENST00000532536 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
SHARPIN-206ENST00000532536 IFT140Q96RY7 1462 aa13□□□□□ -0.33
SHARPIN-206ENST00000532536 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
SHARPIN-206ENST00000532536 CFTRP13569 1480 aa12.98□□□□□ -0.33
SHARPIN-206ENST00000532536 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
SHARPIN-206ENST00000532536 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
SHARPIN-206ENST00000532536 WIZO95785 1651 aa12.82□□□□□ -0.36
SHARPIN-206ENST00000532536 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
SHARPIN-206ENST00000532536 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
SHARPIN-206ENST00000532536 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
SHARPIN-206ENST00000532536 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.361e-8■□□□□ 10.7
SHARPIN-206ENST00000532536 SYNJ1O43426 1573 aa12.77□□□□□ -0.36
SHARPIN-206ENST00000532536 FBLN2P98095 1184 aa12.76□□□□□ -0.37
SHARPIN-206ENST00000532536 KDM4FA0A1W2PPD8 638 aa12.75□□□□□ -0.37
SHARPIN-206ENST00000532536 GAPVD1Q14C86 1478 aa12.75□□□□□ -0.37
SHARPIN-206ENST00000532536 ABCC8Q09428 1581 aa12.74□□□□□ -0.37
SHARPIN-206ENST00000532536 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.37
SHARPIN-206ENST00000532536 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
SHARPIN-206ENST00000532536 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
SHARPIN-206ENST00000532536 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
SHARPIN-206ENST00000532536 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
SHARPIN-206ENST00000532536 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
SHARPIN-206ENST00000532536 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
SHARPIN-206ENST00000532536 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
SHARPIN-206ENST00000532536 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
SHARPIN-206ENST00000532536 FBXO41Q8TF61 875 aa12.59□□□□□ -0.39
SHARPIN-206ENST00000532536 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
SHARPIN-206ENST00000532536 KDM6BO15054 1643 aa12.58□□□□□ -0.4
SHARPIN-206ENST00000532536 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
SHARPIN-206ENST00000532536 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
SHARPIN-206ENST00000532536 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
SHARPIN-206ENST00000532536 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
SHARPIN-206ENST00000532536 LMTK3Q96Q04 1460 aa12.52□□□□□ -0.41
SHARPIN-206ENST00000532536 DIP2BQ9P265 1576 aa12.5□□□□□ -0.41
SHARPIN-206ENST00000532536 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
SHARPIN-206ENST00000532536 SOGA1O94964 1423 aa12.49□□□□□ -0.41
SHARPIN-206ENST00000532536 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
SHARPIN-206ENST00000532536 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
SHARPIN-206ENST00000532536 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
SHARPIN-206ENST00000532536 MAPKBP1O60336 1514 aa12.46□□□□□ -0.42
SHARPIN-206ENST00000532536 FAM69CQ0P6D2 419 aa12.44□□□□□ -0.42
SHARPIN-206ENST00000532536 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
SHARPIN-206ENST00000532536 SOCS7O14512 581 aa12.43□□□□□ -0.42
SHARPIN-206ENST00000532536 TSPOAP1O95153 1857 aa12.42□□□□□ -0.42
SHARPIN-206ENST00000532536 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
SHARPIN-206ENST00000532536 NUP160Q12769 1436 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms