RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 NISCHQ9Y2I1 1504 aa42.27■■■■■ 4.36
PPP1CA-208ENST00000532446 CCDC180Q9P1Z9 1646 aa37.24■■■■□ 3.55
PPP1CA-208ENST00000532446 ABCC9O60706 1549 aa35.86■■■■□ 3.33
PPP1CA-208ENST00000532446 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
PPP1CA-208ENST00000532446 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.2
PPP1CA-208ENST00000532446 DCAF8L2P0C7V8 631 aa34.96■■■■□ 3.19
PPP1CA-208ENST00000532446 MYO15BQ96JP2 1530 aa34.87■■■■□ 3.17
PPP1CA-208ENST00000532446 NACADO15069 1562 aa34.82■■■■□ 3.16
PPP1CA-208ENST00000532446 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
PPP1CA-208ENST00000532446 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
PPP1CA-208ENST00000532446 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
PPP1CA-208ENST00000532446 SHROOM4Q9ULL8 1493 aa33.86■■■■□ 3.01
PPP1CA-208ENST00000532446 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
PPP1CA-208ENST00000532446 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
PPP1CA-208ENST00000532446 DNAJC5BQ9UF47 199 aa33.31■■■□□ 2.92
PPP1CA-208ENST00000532446 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
PPP1CA-208ENST00000532446 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.83
PPP1CA-208ENST00000532446 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
PPP1CA-208ENST00000532446 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
PPP1CA-208ENST00000532446 MROH2BQ7Z745 1585 aa32.6■■■□□ 2.81
PPP1CA-208ENST00000532446 RSF1Q96T23 1441 aaPredicted RBP32.5■■■□□ 2.79
PPP1CA-208ENST00000532446 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
PPP1CA-208ENST00000532446 PEG3Q9GZU2 1588 aa32.31■■■□□ 2.76
PPP1CA-208ENST00000532446 WIZO95785 1651 aa32.3■■■□□ 2.76
PPP1CA-208ENST00000532446 ATAD2BQ9ULI0 1458 aa32.26■■■□□ 2.75
PPP1CA-208ENST00000532446 SMARCA2P51531 1590 aa32.24■■■□□ 2.75
PPP1CA-208ENST00000532446 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
PPP1CA-208ENST00000532446 NCAPD3P42695 1498 aa32.11■■■□□ 2.73
PPP1CA-208ENST00000532446 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
PPP1CA-208ENST00000532446 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
PPP1CA-208ENST00000532446 TOP2AP11388 1531 aaKnown RBP31.98■■■□□ 2.71
PPP1CA-208ENST00000532446 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
PPP1CA-208ENST00000532446 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
PPP1CA-208ENST00000532446 CFTRP13569 1480 aa31.21■■■□□ 2.59
PPP1CA-208ENST00000532446 LAMC3Q9Y6N6 1575 aa31.15■■■□□ 2.58
PPP1CA-208ENST00000532446 NESP48681 1621 aa31.12■■■□□ 2.57
PPP1CA-208ENST00000532446 PRDM2Q13029 1718 aa31.08■■■□□ 2.57
PPP1CA-208ENST00000532446 ERCC6Q03468 1493 aa30.95■■■□□ 2.54
PPP1CA-208ENST00000532446 PDS5BQ9NTI5 1447 aa30.89■■■□□ 2.54
PPP1CA-208ENST00000532446 FANCD2Q9BXW9 1451 aa30.86■■■□□ 2.53
PPP1CA-208ENST00000532446 KIF21AQ7Z4S6 1674 aa30.8■■■□□ 2.52
PPP1CA-208ENST00000532446 CUX2O14529 1486 aa30.8■■■□□ 2.52
PPP1CA-208ENST00000532446 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
PPP1CA-208ENST00000532446 ABCC8Q09428 1581 aa30.7■■■□□ 2.5
PPP1CA-208ENST00000532446 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
PPP1CA-208ENST00000532446 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
PPP1CA-208ENST00000532446 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
PPP1CA-208ENST00000532446 CUX1P39880 1505 aa30.54■■■□□ 2.48
PPP1CA-208ENST00000532446 MRC2Q9UBG0 1479 aa30.54■■■□□ 2.48
PPP1CA-208ENST00000532446 URB2Q14146 1524 aaKnown RBP30.53■■■□□ 2.48
PPP1CA-208ENST00000532446 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
PPP1CA-208ENST00000532446 DNMBPQ6XZF7 1577 aa30.5■■■□□ 2.47
PPP1CA-208ENST00000532446 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
PPP1CA-208ENST00000532446 BIVM-ERCC5R4GMW8 1640 aa30.48■■■□□ 2.47
PPP1CA-208ENST00000532446 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
PPP1CA-208ENST00000532446 WDR62O43379 1518 aa30.43■■■□□ 2.46
PPP1CA-208ENST00000532446 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
PPP1CA-208ENST00000532446 DNAJC5Q9H3Z4 198 aa30.36■■■□□ 2.45
PPP1CA-208ENST00000532446 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
PPP1CA-208ENST00000532446 POLA1P09884 1462 aaPredicted RBP30.26■■■□□ 2.43
PPP1CA-208ENST00000532446 SOGA1O94964 1423 aa30.13■■■□□ 2.41
PPP1CA-208ENST00000532446 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
PPP1CA-208ENST00000532446 TARBP1Q13395 1621 aaKnown RBP30.09■■■□□ 2.41
PPP1CA-208ENST00000532446 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
PPP1CA-208ENST00000532446 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
PPP1CA-208ENST00000532446 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
PPP1CA-208ENST00000532446 KIF27Q86VH2 1401 aa29.9■■■□□ 2.38
PPP1CA-208ENST00000532446 RUSC2Q8N2Y8 1516 aa29.9■■■□□ 2.38
PPP1CA-208ENST00000532446 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
PPP1CA-208ENST00000532446 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
PPP1CA-208ENST00000532446 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
PPP1CA-208ENST00000532446 EEA1Q15075 1411 aa29.85■■■□□ 2.37
PPP1CA-208ENST00000532446 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.361e-7■■■■■ 30.5
PPP1CA-208ENST00000532446 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
PPP1CA-208ENST00000532446 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
PPP1CA-208ENST00000532446 FAM9AQ8IZU1 332 aaPredicted RBP29.76■■■□□ 2.35
PPP1CA-208ENST00000532446 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
PPP1CA-208ENST00000532446 IGF1RP08069 1367 aa29.71■■■□□ 2.35
PPP1CA-208ENST00000532446 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.34
PPP1CA-208ENST00000532446 CSRNP3Q8WYN3 585 aa29.69■■■□□ 2.34
PPP1CA-208ENST00000532446 GRIN2BQ13224 1484 aa29.69■■■□□ 2.34
PPP1CA-208ENST00000532446 CUL7Q14999 1698 aa29.58■■■□□ 2.33
PPP1CA-208ENST00000532446 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
PPP1CA-208ENST00000532446 PRXQ9BXM0 1461 aa29.54■■■□□ 2.32
PPP1CA-208ENST00000532446 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
PPP1CA-208ENST00000532446 MAGI1Q96QZ7 1491 aaPredicted RBP29.54■■■□□ 2.32
PPP1CA-208ENST00000532446 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
PPP1CA-208ENST00000532446 KIF21BO75037 1637 aa29.5■■■□□ 2.31
PPP1CA-208ENST00000532446 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
PPP1CA-208ENST00000532446 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
PPP1CA-208ENST00000532446 RAPGEF2Q9Y4G8 1499 aa29.44■■■□□ 2.3
PPP1CA-208ENST00000532446 SYNJ2O15056 1496 aa29.41■■■□□ 2.3
PPP1CA-208ENST00000532446 GOLGA3Q08378 1498 aa29.37■■■□□ 2.29
PPP1CA-208ENST00000532446 LOC105371045A0A1W2PR82 267 aa29.32■■■□□ 2.28
PPP1CA-208ENST00000532446 GRIN2AQ12879 1464 aa29.32■■■□□ 2.28
PPP1CA-208ENST00000532446 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
PPP1CA-208ENST00000532446 EHMT2Q96KQ7 1210 aa29.31■■■□□ 2.28
PPP1CA-208ENST00000532446 CHD1O14646 1710 aa29.3■■■□□ 2.28
PPP1CA-208ENST00000532446 FBLN2P98095 1184 aa29.27■■■□□ 2.28
PPP1CA-208ENST00000532446 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms