RNA–Protein interactions for RNA: ENST00000532357.1

AP001893.3-201, humanhuman

TSL 4 BASIC

Gene AP001893.3, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001893.3-201ENST00000532357 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
AP001893.3-201ENST00000532357 ABCC9O60706 1549 aa15.3■□□□□ 0.04
AP001893.3-201ENST00000532357 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
AP001893.3-201ENST00000532357 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
AP001893.3-201ENST00000532357 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
AP001893.3-201ENST00000532357 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
AP001893.3-201ENST00000532357 NACADO15069 1562 aa14.22□□□□□ -0.13
AP001893.3-201ENST00000532357 DCAF8L2P0C7V8 631 aa14.14□□□□□ -0.15
AP001893.3-201ENST00000532357 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
AP001893.3-201ENST00000532357 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
AP001893.3-201ENST00000532357 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
AP001893.3-201ENST00000532357 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
AP001893.3-201ENST00000532357 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
AP001893.3-201ENST00000532357 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
AP001893.3-201ENST00000532357 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
AP001893.3-201ENST00000532357 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
AP001893.3-201ENST00000532357 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
AP001893.3-201ENST00000532357 DCAF1Q9Y4B6 1507 aa13.66□□□□□ -0.22
AP001893.3-201ENST00000532357 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
AP001893.3-201ENST00000532357 CUX2O14529 1486 aa13.25□□□□□ -0.29
AP001893.3-201ENST00000532357 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
AP001893.3-201ENST00000532357 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
AP001893.3-201ENST00000532357 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
AP001893.3-201ENST00000532357 NESP48681 1621 aa13.09□□□□□ -0.31
AP001893.3-201ENST00000532357 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
AP001893.3-201ENST00000532357 SMARCA2P51531 1590 aa13□□□□□ -0.33
AP001893.3-201ENST00000532357 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
AP001893.3-201ENST00000532357 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
AP001893.3-201ENST00000532357 BAZ1BQ9UIG0 1483 aaKnown RBP12.92□□□□□ -0.34
AP001893.3-201ENST00000532357 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
AP001893.3-201ENST00000532357 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
AP001893.3-201ENST00000532357 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
AP001893.3-201ENST00000532357 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
AP001893.3-201ENST00000532357 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
AP001893.3-201ENST00000532357 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
AP001893.3-201ENST00000532357 PDS5BQ9NTI5 1447 aa12.81□□□□□ -0.36
AP001893.3-201ENST00000532357 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
AP001893.3-201ENST00000532357 MRC2Q9UBG0 1479 aa12.74□□□□□ -0.37
AP001893.3-201ENST00000532357 WDR62O43379 1518 aa12.72□□□□□ -0.37
AP001893.3-201ENST00000532357 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
AP001893.3-201ENST00000532357 WIZO95785 1651 aa12.63□□□□□ -0.39
AP001893.3-201ENST00000532357 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
AP001893.3-201ENST00000532357 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
AP001893.3-201ENST00000532357 CFTRP13569 1480 aa12.55□□□□□ -0.4
AP001893.3-201ENST00000532357 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
AP001893.3-201ENST00000532357 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
AP001893.3-201ENST00000532357 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
AP001893.3-201ENST00000532357 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
AP001893.3-201ENST00000532357 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
AP001893.3-201ENST00000532357 ZNF608Q9ULD9 1512 aaPredicted RBP12.45□□□□□ -0.42
AP001893.3-201ENST00000532357 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
AP001893.3-201ENST00000532357 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
AP001893.3-201ENST00000532357 AEBP2Q6ZN18 517 aaPredicted RBP12.4□□□□□ -0.42
AP001893.3-201ENST00000532357 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
AP001893.3-201ENST00000532357 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
AP001893.3-201ENST00000532357 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
AP001893.3-201ENST00000532357 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
AP001893.3-201ENST00000532357 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
AP001893.3-201ENST00000532357 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
AP001893.3-201ENST00000532357 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
AP001893.3-201ENST00000532357 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.44
AP001893.3-201ENST00000532357 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
AP001893.3-201ENST00000532357 CHD1O14646 1710 aa12.27□□□□□ -0.45
AP001893.3-201ENST00000532357 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
AP001893.3-201ENST00000532357 FBLN2P98095 1184 aa12.24□□□□□ -0.45
AP001893.3-201ENST00000532357 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
AP001893.3-201ENST00000532357 ABCC8Q09428 1581 aa12.23□□□□□ -0.45
AP001893.3-201ENST00000532357 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.46
AP001893.3-201ENST00000532357 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
AP001893.3-201ENST00000532357 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
AP001893.3-201ENST00000532357 CLASP1Q7Z460 1538 aa12.15□□□□□ -0.46
AP001893.3-201ENST00000532357 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
AP001893.3-201ENST00000532357 SOGA1O94964 1423 aa12.13□□□□□ -0.47
AP001893.3-201ENST00000532357 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
AP001893.3-201ENST00000532357 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.47
AP001893.3-201ENST00000532357 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
AP001893.3-201ENST00000532357 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
AP001893.3-201ENST00000532357 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
AP001893.3-201ENST00000532357 CUX1P39880 1505 aa12.06□□□□□ -0.48
AP001893.3-201ENST00000532357 GRIN2BQ13224 1484 aa12.05□□□□□ -0.48
AP001893.3-201ENST00000532357 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
AP001893.3-201ENST00000532357 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
AP001893.3-201ENST00000532357 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
AP001893.3-201ENST00000532357 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
AP001893.3-201ENST00000532357 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
AP001893.3-201ENST00000532357 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
AP001893.3-201ENST00000532357 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
AP001893.3-201ENST00000532357 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
AP001893.3-201ENST00000532357 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
AP001893.3-201ENST00000532357 NUP160Q12769 1436 aa11.88□□□□□ -0.51
AP001893.3-201ENST00000532357 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
AP001893.3-201ENST00000532357 SHROOM2Q13796 1616 aa11.84□□□□□ -0.51
AP001893.3-201ENST00000532357 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.51
AP001893.3-201ENST00000532357 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
AP001893.3-201ENST00000532357 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
AP001893.3-201ENST00000532357 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
AP001893.3-201ENST00000532357 JPH4Q96JJ6 628 aa11.77□□□□□ -0.53
AP001893.3-201ENST00000532357 FAM69CQ0P6D2 419 aa11.76□□□□□ -0.53
AP001893.3-201ENST00000532357 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
AP001893.3-201ENST00000532357 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms