RNA–Protein interactions for RNA: ENST00000532249.1

SOX9-AS1-209, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-209ENST00000532249 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
SOX9-AS1-209ENST00000532249 CHIC1Q5VXU3 224 aa14.28□□□□□ -0.12
SOX9-AS1-209ENST00000532249 NISCHQ9Y2I1 1504 aa13.26□□□□□ -0.29
SOX9-AS1-209ENST00000532249 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
SOX9-AS1-209ENST00000532249 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
SOX9-AS1-209ENST00000532249 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
SOX9-AS1-209ENST00000532249 FOXD1Q16676 465 aa12.27□□□□□ -0.45
SOX9-AS1-209ENST00000532249 CCDC180Q9P1Z9 1646 aa11.9□□□□□ -0.5
SOX9-AS1-209ENST00000532249 MSH5O43196 834 aa11.85□□□□□ -0.51
SOX9-AS1-209ENST00000532249 ABCC9O60706 1549 aa11.39□□□□□ -0.59
SOX9-AS1-209ENST00000532249 PIAS4Q8N2W9 510 aaPredicted RBP11.36□□□□□ -0.59
SOX9-AS1-209ENST00000532249 MYO15BQ96JP2 1530 aa11.12□□□□□ -0.63
SOX9-AS1-209ENST00000532249 NACADO15069 1562 aa11.11□□□□□ -0.63
SOX9-AS1-209ENST00000532249 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
SOX9-AS1-209ENST00000532249 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-209ENST00000532249 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
SOX9-AS1-209ENST00000532249 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
SOX9-AS1-209ENST00000532249 DCAF8L2P0C7V8 631 aa10.88□□□□□ -0.67
SOX9-AS1-209ENST00000532249 ADRA2BP18089 450 aa10.86□□□□□ -0.67
SOX9-AS1-209ENST00000532249 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
SOX9-AS1-209ENST00000532249 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
SOX9-AS1-209ENST00000532249 SHROOM4Q9ULL8 1493 aa10.76□□□□□ -0.69
SOX9-AS1-209ENST00000532249 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
SOX9-AS1-209ENST00000532249 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.7
SOX9-AS1-209ENST00000532249 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
SOX9-AS1-209ENST00000532249 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
SOX9-AS1-209ENST00000532249 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
SOX9-AS1-209ENST00000532249 EIF4G1Q04637 1599 aaKnown RBP10.41□□□□□ -0.74
SOX9-AS1-209ENST00000532249 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
SOX9-AS1-209ENST00000532249 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
SOX9-AS1-209ENST00000532249 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
SOX9-AS1-209ENST00000532249 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
SOX9-AS1-209ENST00000532249 DMRT2Q9Y5R5 561 aa10.26□□□□□ -0.77
SOX9-AS1-209ENST00000532249 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
SOX9-AS1-209ENST00000532249 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
SOX9-AS1-209ENST00000532249 HMGXB3Q12766 1538 aa10.22□□□□□ -0.77
SOX9-AS1-209ENST00000532249 NCAPD3P42695 1498 aa10.18□□□□□ -0.78
SOX9-AS1-209ENST00000532249 MAPK8IP2Q13387 824 aaPredicted RBP10.18□□□□□ -0.78
SOX9-AS1-209ENST00000532249 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
SOX9-AS1-209ENST00000532249 MROH2BQ7Z745 1585 aa10.15□□□□□ -0.78
SOX9-AS1-209ENST00000532249 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
SOX9-AS1-209ENST00000532249 WIZO95785 1651 aa10.09□□□□□ -0.79
SOX9-AS1-209ENST00000532249 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-209ENST00000532249 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-209ENST00000532249 TOP2AP11388 1531 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-209ENST00000532249 DCAF8L1A6NGE4 600 aa10.02□□□□□ -0.81
SOX9-AS1-209ENST00000532249 LAMC3Q9Y6N6 1575 aa9.98□□□□□ -0.81
SOX9-AS1-209ENST00000532249 RNF39Q9H2S5 420 aa9.97□□□□□ -0.81
SOX9-AS1-209ENST00000532249 PRDM2Q13029 1718 aa9.96□□□□□ -0.82
SOX9-AS1-209ENST00000532249 NESP48681 1621 aa9.89□□□□□ -0.83
SOX9-AS1-209ENST00000532249 POTEHQ6S545 545 aa9.87□□□□□ -0.83
SOX9-AS1-209ENST00000532249 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
SOX9-AS1-209ENST00000532249 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
SOX9-AS1-209ENST00000532249 C1QBPQ07021 282 aaKnown RBP9.85□□□□□ -0.83
SOX9-AS1-209ENST00000532249 CFTRP13569 1480 aa9.85□□□□□ -0.83
SOX9-AS1-209ENST00000532249 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
SOX9-AS1-209ENST00000532249 CCDC88BA6NC98 1476 aa9.84□□□□□ -0.83
SOX9-AS1-209ENST00000532249 KIF21AQ7Z4S6 1674 aa9.81□□□□□ -0.84
SOX9-AS1-209ENST00000532249 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
SOX9-AS1-209ENST00000532249 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
SOX9-AS1-209ENST00000532249 CUX2O14529 1486 aa9.77□□□□□ -0.85
SOX9-AS1-209ENST00000532249 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
SOX9-AS1-209ENST00000532249 FANCD2Q9BXW9 1451 aa9.76□□□□□ -0.85
SOX9-AS1-209ENST00000532249 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
SOX9-AS1-209ENST00000532249 ABCC8Q09428 1581 aa9.73□□□□□ -0.85
SOX9-AS1-209ENST00000532249 WDR62O43379 1518 aa9.72□□□□□ -0.85
SOX9-AS1-209ENST00000532249 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
SOX9-AS1-209ENST00000532249 URB2Q14146 1524 aaKnown RBP9.62□□□□□ -0.87
SOX9-AS1-209ENST00000532249 WDR97A6NE52 1622 aa9.62□□□□□ -0.87
SOX9-AS1-209ENST00000532249 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
SOX9-AS1-209ENST00000532249 HOXD11P31277 338 aaPredicted RBP9.59□□□□□ -0.87
SOX9-AS1-209ENST00000532249 BIVM-ERCC5R4GMW8 1640 aa9.59□□□□□ -0.87
SOX9-AS1-209ENST00000532249 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
SOX9-AS1-209ENST00000532249 TOP2BQ02880 1626 aa9.57□□□□□ -0.88
SOX9-AS1-209ENST00000532249 CUX1P39880 1505 aa9.55□□□□□ -0.88
SOX9-AS1-209ENST00000532249 WRNQ14191 1432 aaPredicted RBP eCLIP9.55□□□□□ -0.88
SOX9-AS1-209ENST00000532249 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
SOX9-AS1-209ENST00000532249 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
SOX9-AS1-209ENST00000532249 PPP4R3CPQ6ZMV5 832 aa9.52□□□□□ -0.89
SOX9-AS1-209ENST00000532249 FGD5Q6ZNL6 1462 aa9.52□□□□□ -0.89
SOX9-AS1-209ENST00000532249 SYNJ1O43426 1573 aa9.5□□□□□ -0.89
SOX9-AS1-209ENST00000532249 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
SOX9-AS1-209ENST00000532249 SOGA1O94964 1423 aa9.48□□□□□ -0.89
SOX9-AS1-209ENST00000532249 ABCA10Q8WWZ4 1543 aa9.47□□□□□ -0.89
SOX9-AS1-209ENST00000532249 PBRM1Q86U86 1689 aa9.46□□□□□ -0.89
SOX9-AS1-209ENST00000532249 ZNF608Q9ULD9 1512 aaPredicted RBP9.45□□□□□ -0.9
SOX9-AS1-209ENST00000532249 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
SOX9-AS1-209ENST00000532249 MAGI1Q96QZ7 1491 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-209ENST00000532249 RAD54L2Q9Y4B4 1467 aa9.41□□□□□ -0.9
SOX9-AS1-209ENST00000532249 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
SOX9-AS1-209ENST00000532249 GRIN2BQ13224 1484 aa9.4□□□□□ -0.9
SOX9-AS1-209ENST00000532249 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.9
SOX9-AS1-209ENST00000532249 CUL7Q14999 1698 aa9.39□□□□□ -0.91
SOX9-AS1-209ENST00000532249 KIF27Q86VH2 1401 aa9.38□□□□□ -0.91
SOX9-AS1-209ENST00000532249 CHD1O14646 1710 aa9.36□□□□□ -0.91
SOX9-AS1-209ENST00000532249 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
SOX9-AS1-209ENST00000532249 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-209ENST00000532249 ADAMTS12P58397 1594 aa9.35□□□□□ -0.91
SOX9-AS1-209ENST00000532249 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
SOX9-AS1-209ENST00000532249 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms