RNA–Protein interactions for RNA: ENST00000532155.5

GDPD4-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 4, humanhuman

TSL 4

Gene GDPD4, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4-204ENST00000532155 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
GDPD4-204ENST00000532155 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
GDPD4-204ENST00000532155 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
GDPD4-204ENST00000532155 ABCC9O60706 1549 aa13.82□□□□□ -0.2
GDPD4-204ENST00000532155 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
GDPD4-204ENST00000532155 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
GDPD4-204ENST00000532155 DNAJC5BQ9UF47 199 aa13.09□□□□□ -0.31
GDPD4-204ENST00000532155 RB1CC1Q8TDY2 1594 aa13□□□□□ -0.33
GDPD4-204ENST00000532155 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
GDPD4-204ENST00000532155 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
GDPD4-204ENST00000532155 NACADO15069 1562 aa12.87□□□□□ -0.35
GDPD4-204ENST00000532155 UNC13AQ9UPW8 1703 aa12.7□□□□□ -0.38
GDPD4-204ENST00000532155 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
GDPD4-204ENST00000532155 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
GDPD4-204ENST00000532155 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
GDPD4-204ENST00000532155 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
GDPD4-204ENST00000532155 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
GDPD4-204ENST00000532155 PLPPR3Q6T4P5 718 aa12.47□□□□□ -0.41
GDPD4-204ENST00000532155 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
GDPD4-204ENST00000532155 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
GDPD4-204ENST00000532155 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
GDPD4-204ENST00000532155 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
GDPD4-204ENST00000532155 EIF4G1Q04637 1599 aaKnown RBP12.36□□□□□ -0.43
GDPD4-204ENST00000532155 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
GDPD4-204ENST00000532155 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
GDPD4-204ENST00000532155 NCAPD3P42695 1498 aa11.91□□□□□ -0.5
GDPD4-204ENST00000532155 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
GDPD4-204ENST00000532155 CUX2O14529 1486 aa11.87□□□□□ -0.51
GDPD4-204ENST00000532155 NESP48681 1621 aa11.85□□□□□ -0.51
GDPD4-204ENST00000532155 ADRA2BP18089 450 aa11.84□□□□□ -0.51
GDPD4-204ENST00000532155 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
GDPD4-204ENST00000532155 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
GDPD4-204ENST00000532155 HMGXB3Q12766 1538 aa11.79□□□□□ -0.52
GDPD4-204ENST00000532155 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.52
GDPD4-204ENST00000532155 BAZ1AQ9NRL2 1556 aaPredicted RBP11.74□□□□□ -0.53
GDPD4-204ENST00000532155 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
GDPD4-204ENST00000532155 PPP6R1Q9UPN7 881 aa11.69□□□□□ -0.54
GDPD4-204ENST00000532155 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
GDPD4-204ENST00000532155 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
GDPD4-204ENST00000532155 FOXD1Q16676 465 aa11.64□□□□□ -0.55
GDPD4-204ENST00000532155 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
GDPD4-204ENST00000532155 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
GDPD4-204ENST00000532155 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
GDPD4-204ENST00000532155 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
GDPD4-204ENST00000532155 KCNA4P22459 653 aa11.56□□□□□ -0.56
GDPD4-204ENST00000532155 WIZO95785 1651 aa11.55□□□□□ -0.56
GDPD4-204ENST00000532155 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
GDPD4-204ENST00000532155 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
GDPD4-204ENST00000532155 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.57
GDPD4-204ENST00000532155 WDR62O43379 1518 aa11.49□□□□□ -0.57
GDPD4-204ENST00000532155 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.57
GDPD4-204ENST00000532155 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
GDPD4-204ENST00000532155 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
GDPD4-204ENST00000532155 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
GDPD4-204ENST00000532155 CFTRP13569 1480 aa11.4□□□□□ -0.58
GDPD4-204ENST00000532155 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
GDPD4-204ENST00000532155 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
GDPD4-204ENST00000532155 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
GDPD4-204ENST00000532155 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
GDPD4-204ENST00000532155 CCDC88BA6NC98 1476 aa11.28□□□□□ -0.6
GDPD4-204ENST00000532155 IFT140Q96RY7 1462 aa11.23□□□□□ -0.61
GDPD4-204ENST00000532155 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
GDPD4-204ENST00000532155 RIMBP3CA6NJZ7 1639 aa11.21□□□□□ -0.61
GDPD4-204ENST00000532155 RIMBP3BA6NNM3 1639 aa11.21□□□□□ -0.61
GDPD4-204ENST00000532155 RIMBP3Q9UFD9 1639 aa11.21□□□□□ -0.61
GDPD4-204ENST00000532155 PRDM2Q13029 1718 aa11.19□□□□□ -0.62
GDPD4-204ENST00000532155 ARHGEF11O15085 1522 aa11.17□□□□□ -0.62
GDPD4-204ENST00000532155 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.62
GDPD4-204ENST00000532155 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
GDPD4-204ENST00000532155 FBLN2P98095 1184 aa11.15□□□□□ -0.62
GDPD4-204ENST00000532155 CYB5RLQ6IPT4 315 aa11.15□□□□□ -0.62
GDPD4-204ENST00000532155 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
GDPD4-204ENST00000532155 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
GDPD4-204ENST00000532155 PIAS4Q8N2W9 510 aaPredicted RBP11.12□□□□□ -0.63
GDPD4-204ENST00000532155 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
GDPD4-204ENST00000532155 POLA1P09884 1462 aaPredicted RBP11.11□□□□□ -0.63
GDPD4-204ENST00000532155 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
GDPD4-204ENST00000532155 TARBP1Q13395 1621 aaKnown RBP11.1□□□□□ -0.63
GDPD4-204ENST00000532155 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
GDPD4-204ENST00000532155 CHD1O14646 1710 aa11.09□□□□□ -0.63
GDPD4-204ENST00000532155 ARAP1Q96P48 1450 aa11.07□□□□□ -0.64
GDPD4-204ENST00000532155 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
GDPD4-204ENST00000532155 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
GDPD4-204ENST00000532155 SOGA1O94964 1423 aa11.06□□□□□ -0.64
GDPD4-204ENST00000532155 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
GDPD4-204ENST00000532155 FGD5Q6ZNL6 1462 aa11.04□□□□□ -0.64
GDPD4-204ENST00000532155 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
GDPD4-204ENST00000532155 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
GDPD4-204ENST00000532155 CUX1P39880 1505 aa11□□□□□ -0.65
GDPD4-204ENST00000532155 CLASP1Q7Z460 1538 aa10.96□□□□□ -0.65
GDPD4-204ENST00000532155 GRIN2BQ13224 1484 aa10.95□□□□□ -0.66
GDPD4-204ENST00000532155 MAGI1Q96QZ7 1491 aaPredicted RBP10.94□□□□□ -0.66
GDPD4-204ENST00000532155 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
GDPD4-204ENST00000532155 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
GDPD4-204ENST00000532155 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
GDPD4-204ENST00000532155 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
GDPD4-204ENST00000532155 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
GDPD4-204ENST00000532155 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
GDPD4-204ENST00000532155 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
GDPD4-204ENST00000532155 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms