RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
KNL1-208ENST00000532056 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
KNL1-208ENST00000532056 ABCC9O60706 1549 aa20.86■□□□□ 0.93
KNL1-208ENST00000532056 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
KNL1-208ENST00000532056 NACADO15069 1562 aa20.19■□□□□ 0.82
KNL1-208ENST00000532056 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
KNL1-208ENST00000532056 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
KNL1-208ENST00000532056 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
KNL1-208ENST00000532056 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
KNL1-208ENST00000532056 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
KNL1-208ENST00000532056 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
KNL1-208ENST00000532056 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
KNL1-208ENST00000532056 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
KNL1-208ENST00000532056 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
KNL1-208ENST00000532056 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.64
KNL1-208ENST00000532056 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
KNL1-208ENST00000532056 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
KNL1-208ENST00000532056 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
KNL1-208ENST00000532056 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
KNL1-208ENST00000532056 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
KNL1-208ENST00000532056 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
KNL1-208ENST00000532056 SMARCA2P51531 1590 aa18.64■□□□□ 0.58
KNL1-208ENST00000532056 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
KNL1-208ENST00000532056 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
KNL1-208ENST00000532056 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
KNL1-208ENST00000532056 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
KNL1-208ENST00000532056 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
KNL1-208ENST00000532056 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
KNL1-208ENST00000532056 WIZO95785 1651 aa18.49■□□□□ 0.55
KNL1-208ENST00000532056 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
KNL1-208ENST00000532056 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
KNL1-208ENST00000532056 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
KNL1-208ENST00000532056 NESP48681 1621 aa18.09■□□□□ 0.49
KNL1-208ENST00000532056 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
KNL1-208ENST00000532056 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
KNL1-208ENST00000532056 CFTRP13569 1480 aa18.01■□□□□ 0.47
KNL1-208ENST00000532056 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
KNL1-208ENST00000532056 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
KNL1-208ENST00000532056 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
KNL1-208ENST00000532056 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
KNL1-208ENST00000532056 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
KNL1-208ENST00000532056 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
KNL1-208ENST00000532056 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.45
KNL1-208ENST00000532056 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
KNL1-208ENST00000532056 CUX2O14529 1486 aa17.75■□□□□ 0.43
KNL1-208ENST00000532056 WDR62O43379 1518 aa17.73■□□□□ 0.43
KNL1-208ENST00000532056 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
KNL1-208ENST00000532056 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
KNL1-208ENST00000532056 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
KNL1-208ENST00000532056 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
KNL1-208ENST00000532056 CUX1P39880 1505 aa17.52■□□□□ 0.4
KNL1-208ENST00000532056 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
KNL1-208ENST00000532056 IFT140Q96RY7 1462 aa17.46■□□□□ 0.39
KNL1-208ENST00000532056 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
KNL1-208ENST00000532056 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
KNL1-208ENST00000532056 BIVM-ERCC5R4GMW8 1640 aa17.44■□□□□ 0.38
KNL1-208ENST00000532056 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
KNL1-208ENST00000532056 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
KNL1-208ENST00000532056 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
KNL1-208ENST00000532056 SOGA1O94964 1423 aa17.37■□□□□ 0.37
KNL1-208ENST00000532056 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
KNL1-208ENST00000532056 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
KNL1-208ENST00000532056 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
KNL1-208ENST00000532056 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
KNL1-208ENST00000532056 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
KNL1-208ENST00000532056 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.357e-8■■■■□ 20.5
KNL1-208ENST00000532056 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
KNL1-208ENST00000532056 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
KNL1-208ENST00000532056 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
KNL1-208ENST00000532056 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
KNL1-208ENST00000532056 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
KNL1-208ENST00000532056 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
KNL1-208ENST00000532056 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
KNL1-208ENST00000532056 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
KNL1-208ENST00000532056 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
KNL1-208ENST00000532056 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
KNL1-208ENST00000532056 CHD1O14646 1710 aa17.07■□□□□ 0.32
KNL1-208ENST00000532056 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
KNL1-208ENST00000532056 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
KNL1-208ENST00000532056 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
KNL1-208ENST00000532056 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
KNL1-208ENST00000532056 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
KNL1-208ENST00000532056 CUL7Q14999 1698 aa16.98■□□□□ 0.31
KNL1-208ENST00000532056 FBLN2P98095 1184 aa16.98■□□□□ 0.31
KNL1-208ENST00000532056 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
KNL1-208ENST00000532056 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
KNL1-208ENST00000532056 IGF1RP08069 1367 aa16.97■□□□□ 0.31
KNL1-208ENST00000532056 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.3
KNL1-208ENST00000532056 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
KNL1-208ENST00000532056 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
KNL1-208ENST00000532056 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
KNL1-208ENST00000532056 NUP160Q12769 1436 aa16.87■□□□□ 0.29
KNL1-208ENST00000532056 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
KNL1-208ENST00000532056 EEA1Q15075 1411 aa16.87■□□□□ 0.29
KNL1-208ENST00000532056 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
KNL1-208ENST00000532056 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
KNL1-208ENST00000532056 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
KNL1-208ENST00000532056 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
KNL1-208ENST00000532056 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
KNL1-208ENST00000532056 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms