RNA–Protein interactions for RNA: ENST00000531971.1

DDX6-204, Transcript of DEAD-box helicase 6, humanhuman

TSL 3

Gene DDX6, Length 4,373 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6-204ENST00000531971 NISCHQ9Y2I1 1504 aa15.6■□□□□ 0.09
DDX6-204ENST00000531971 CCDC180Q9P1Z9 1646 aa14.49□□□□□ -0.09
DDX6-204ENST00000531971 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
DDX6-204ENST00000531971 DCAF1Q9Y4B6 1507 aa13.53□□□□□ -0.24
DDX6-204ENST00000531971 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
DDX6-204ENST00000531971 NACADO15069 1562 aa13.27□□□□□ -0.29
DDX6-204ENST00000531971 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
DDX6-204ENST00000531971 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
DDX6-204ENST00000531971 RB1CC1Q8TDY2 1594 aa13.1□□□□□ -0.31
DDX6-204ENST00000531971 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
DDX6-204ENST00000531971 ABCC9O60706 1549 aa12.89□□□□□ -0.35
DDX6-204ENST00000531971 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
DDX6-204ENST00000531971 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
DDX6-204ENST00000531971 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
DDX6-204ENST00000531971 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
DDX6-204ENST00000531971 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
DDX6-204ENST00000531971 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
DDX6-204ENST00000531971 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.46
DDX6-204ENST00000531971 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
DDX6-204ENST00000531971 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
DDX6-204ENST00000531971 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
DDX6-204ENST00000531971 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
DDX6-204ENST00000531971 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
DDX6-204ENST00000531971 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
DDX6-204ENST00000531971 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
DDX6-204ENST00000531971 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
DDX6-204ENST00000531971 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
DDX6-204ENST00000531971 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
DDX6-204ENST00000531971 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
DDX6-204ENST00000531971 BAZ1BQ9UIG0 1483 aaKnown RBP11.88□□□□□ -0.51
DDX6-204ENST00000531971 ATAD2BQ9ULI0 1458 aa11.87□□□□□ -0.51
DDX6-204ENST00000531971 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
DDX6-204ENST00000531971 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
DDX6-204ENST00000531971 WDR97A6NE52 1622 aa11.83□□□□□ -0.52
DDX6-204ENST00000531971 WIZO95785 1651 aa11.77□□□□□ -0.53
DDX6-204ENST00000531971 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
DDX6-204ENST00000531971 FAM9AQ8IZU1 332 aaPredicted RBP11.67□□□□□ -0.54
DDX6-204ENST00000531971 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
DDX6-204ENST00000531971 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.55
DDX6-204ENST00000531971 CUX2O14529 1486 aa11.59□□□□□ -0.55
DDX6-204ENST00000531971 WDR62O43379 1518 aa11.59□□□□□ -0.55
DDX6-204ENST00000531971 CFTRP13569 1480 aa11.57□□□□□ -0.56
DDX6-204ENST00000531971 EEA1Q15075 1411 aa11.56□□□□□ -0.56
DDX6-204ENST00000531971 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
DDX6-204ENST00000531971 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
DDX6-204ENST00000531971 APLP2Q06481 763 aa11.53□□□□□ -0.56
DDX6-204ENST00000531971 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
DDX6-204ENST00000531971 ABCC8Q09428 1581 aa11.52□□□□□ -0.57
DDX6-204ENST00000531971 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
DDX6-204ENST00000531971 KIF21AQ7Z4S6 1674 aa11.5□□□□□ -0.57
DDX6-204ENST00000531971 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
DDX6-204ENST00000531971 PDS5BQ9NTI5 1447 aa11.45□□□□□ -0.58
DDX6-204ENST00000531971 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
DDX6-204ENST00000531971 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
DDX6-204ENST00000531971 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
DDX6-204ENST00000531971 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
DDX6-204ENST00000531971 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
DDX6-204ENST00000531971 CEP164Q9UPV0 1460 aa11.35□□□□□ -0.59
DDX6-204ENST00000531971 ERCC6Q03468 1493 aa11.34□□□□□ -0.59
DDX6-204ENST00000531971 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
DDX6-204ENST00000531971 TOP2BQ02880 1626 aa11.33□□□□□ -0.6
DDX6-204ENST00000531971 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
DDX6-204ENST00000531971 GOLGA3Q08378 1498 aa11.33□□□□□ -0.6
DDX6-204ENST00000531971 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
DDX6-204ENST00000531971 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
DDX6-204ENST00000531971 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
DDX6-204ENST00000531971 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
DDX6-204ENST00000531971 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
DDX6-204ENST00000531971 IFT140Q96RY7 1462 aa11.22□□□□□ -0.61
DDX6-204ENST00000531971 SOGA1O94964 1423 aa11.21□□□□□ -0.62
DDX6-204ENST00000531971 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
DDX6-204ENST00000531971 TRIM26Q12899 539 aaPredicted RBP11.19□□□□□ -0.62
DDX6-204ENST00000531971 SYNJ1O43426 1573 aa11.19□□□□□ -0.62
DDX6-204ENST00000531971 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
DDX6-204ENST00000531971 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
DDX6-204ENST00000531971 CUL7Q14999 1698 aa11.18□□□□□ -0.62
DDX6-204ENST00000531971 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
DDX6-204ENST00000531971 ABCA10Q8WWZ4 1543 aa11.16□□□□□ -0.62
DDX6-204ENST00000531971 CLIP1P30622 1438 aa11.15□□□□□ -0.62
DDX6-204ENST00000531971 PCGF6Q9BYE7 350 aa11.14□□□□□ -0.63
DDX6-204ENST00000531971 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
DDX6-204ENST00000531971 CUX1P39880 1505 aa11.14□□□□□ -0.63
DDX6-204ENST00000531971 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
DDX6-204ENST00000531971 CARMIL1Q5VZK9 1371 aa11.14□□□□□ -0.63
DDX6-204ENST00000531971 NESP48681 1621 aa11.13□□□□□ -0.63
DDX6-204ENST00000531971 KIF21BO75037 1637 aa11.11□□□□□ -0.63
DDX6-204ENST00000531971 SHROOM2Q13796 1616 aa11.11□□□□□ -0.63
DDX6-204ENST00000531971 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
DDX6-204ENST00000531971 RAPGEF2Q9Y4G8 1499 aa11.1□□□□□ -0.63
DDX6-204ENST00000531971 ZEB1P37275 1124 aaPredicted RBP11.09□□□□□ -0.63
DDX6-204ENST00000531971 FBLN2P98095 1184 aa11.08□□□□□ -0.64
DDX6-204ENST00000531971 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
DDX6-204ENST00000531971 HRCP23327 699 aa11.07□□□□□ -0.64
DDX6-204ENST00000531971 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
DDX6-204ENST00000531971 ADAMTS12P58397 1594 aa11.06□□□□□ -0.64
DDX6-204ENST00000531971 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
DDX6-204ENST00000531971 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
DDX6-204ENST00000531971 GAPVD1Q14C86 1478 aa11.05□□□□□ -0.64
DDX6-204ENST00000531971 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
DDX6-204ENST00000531971 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms