RNA–Protein interactions for RNA: ENST00000531933.1

ATG13-218, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-218ENST00000531933 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
ATG13-218ENST00000531933 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
ATG13-218ENST00000531933 ABCC9O60706 1549 aa20.68■□□□□ 0.9
ATG13-218ENST00000531933 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
ATG13-218ENST00000531933 NACADO15069 1562 aa19.97■□□□□ 0.79
ATG13-218ENST00000531933 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
ATG13-218ENST00000531933 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
ATG13-218ENST00000531933 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
ATG13-218ENST00000531933 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
ATG13-218ENST00000531933 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
ATG13-218ENST00000531933 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
ATG13-218ENST00000531933 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
ATG13-218ENST00000531933 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
ATG13-218ENST00000531933 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
ATG13-218ENST00000531933 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
ATG13-218ENST00000531933 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
ATG13-218ENST00000531933 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
ATG13-218ENST00000531933 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
ATG13-218ENST00000531933 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
ATG13-218ENST00000531933 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
ATG13-218ENST00000531933 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
ATG13-218ENST00000531933 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
ATG13-218ENST00000531933 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
ATG13-218ENST00000531933 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
ATG13-218ENST00000531933 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
ATG13-218ENST00000531933 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
ATG13-218ENST00000531933 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
ATG13-218ENST00000531933 WIZO95785 1651 aa18.25■□□□□ 0.51
ATG13-218ENST00000531933 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
ATG13-218ENST00000531933 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.49
ATG13-218ENST00000531933 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
ATG13-218ENST00000531933 NESP48681 1621 aa17.89■□□□□ 0.45
ATG13-218ENST00000531933 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
ATG13-218ENST00000531933 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
ATG13-218ENST00000531933 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
ATG13-218ENST00000531933 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
ATG13-218ENST00000531933 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
ATG13-218ENST00000531933 CFTRP13569 1480 aa17.76■□□□□ 0.43
ATG13-218ENST00000531933 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
ATG13-218ENST00000531933 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
ATG13-218ENST00000531933 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
ATG13-218ENST00000531933 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
ATG13-218ENST00000531933 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
ATG13-218ENST00000531933 CUX2O14529 1486 aa17.63■□□□□ 0.41
ATG13-218ENST00000531933 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
ATG13-218ENST00000531933 WDR62O43379 1518 aa17.53■□□□□ 0.4
ATG13-218ENST00000531933 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
ATG13-218ENST00000531933 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
ATG13-218ENST00000531933 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
ATG13-218ENST00000531933 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
ATG13-218ENST00000531933 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
ATG13-218ENST00000531933 CUX1P39880 1505 aa17.27■□□□□ 0.36
ATG13-218ENST00000531933 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
ATG13-218ENST00000531933 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
ATG13-218ENST00000531933 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
ATG13-218ENST00000531933 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
ATG13-218ENST00000531933 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
ATG13-218ENST00000531933 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
ATG13-218ENST00000531933 SOGA1O94964 1423 aa17.19■□□□□ 0.34
ATG13-218ENST00000531933 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
ATG13-218ENST00000531933 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
ATG13-218ENST00000531933 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
ATG13-218ENST00000531933 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
ATG13-218ENST00000531933 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
ATG13-218ENST00000531933 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
ATG13-218ENST00000531933 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATG13-218ENST00000531933 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
ATG13-218ENST00000531933 PBRM1Q86U86 1689 aa17■□□□□ 0.31
ATG13-218ENST00000531933 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
ATG13-218ENST00000531933 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
ATG13-218ENST00000531933 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
ATG13-218ENST00000531933 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
ATG13-218ENST00000531933 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
ATG13-218ENST00000531933 CHD1O14646 1710 aa16.91■□□□□ 0.3
ATG13-218ENST00000531933 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
ATG13-218ENST00000531933 FBLN2P98095 1184 aa16.9■□□□□ 0.3
ATG13-218ENST00000531933 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
ATG13-218ENST00000531933 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
ATG13-218ENST00000531933 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
ATG13-218ENST00000531933 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
ATG13-218ENST00000531933 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
ATG13-218ENST00000531933 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
ATG13-218ENST00000531933 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
ATG13-218ENST00000531933 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
ATG13-218ENST00000531933 CUL7Q14999 1698 aa16.79■□□□□ 0.28
ATG13-218ENST00000531933 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
ATG13-218ENST00000531933 IGF1RP08069 1367 aa16.73■□□□□ 0.27
ATG13-218ENST00000531933 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
ATG13-218ENST00000531933 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
ATG13-218ENST00000531933 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
ATG13-218ENST00000531933 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
ATG13-218ENST00000531933 NUP160Q12769 1436 aa16.66■□□□□ 0.26
ATG13-218ENST00000531933 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
ATG13-218ENST00000531933 EEA1Q15075 1411 aa16.65■□□□□ 0.26
ATG13-218ENST00000531933 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
ATG13-218ENST00000531933 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
ATG13-218ENST00000531933 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
ATG13-218ENST00000531933 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
ATG13-218ENST00000531933 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
ATG13-218ENST00000531933 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms