RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
PSMC3-211ENST00000531653 ABCC9O60706 1549 aa27.36■■□□□ 1.97
PSMC3-211ENST00000531653 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
PSMC3-211ENST00000531653 DNAJC5BQ9UF47 199 aa26.36■■□□□ 1.81
PSMC3-211ENST00000531653 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
PSMC3-211ENST00000531653 NACADO15069 1562 aa25.49■■□□□ 1.67
PSMC3-211ENST00000531653 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
PSMC3-211ENST00000531653 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
PSMC3-211ENST00000531653 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
PSMC3-211ENST00000531653 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
PSMC3-211ENST00000531653 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
PSMC3-211ENST00000531653 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
PSMC3-211ENST00000531653 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
PSMC3-211ENST00000531653 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
PSMC3-211ENST00000531653 DNAJC5Q9H3Z4 198 aa24.73■■□□□ 1.55
PSMC3-211ENST00000531653 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
PSMC3-211ENST00000531653 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
PSMC3-211ENST00000531653 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
PSMC3-211ENST00000531653 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
PSMC3-211ENST00000531653 CUX2O14529 1486 aa23.96■■□□□ 1.43
PSMC3-211ENST00000531653 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
PSMC3-211ENST00000531653 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
PSMC3-211ENST00000531653 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
PSMC3-211ENST00000531653 NESP48681 1621 aa23.34■■□□□ 1.33
PSMC3-211ENST00000531653 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
PSMC3-211ENST00000531653 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
PSMC3-211ENST00000531653 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
PSMC3-211ENST00000531653 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
PSMC3-211ENST00000531653 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
PSMC3-211ENST00000531653 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
PSMC3-211ENST00000531653 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
PSMC3-211ENST00000531653 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
PSMC3-211ENST00000531653 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
PSMC3-211ENST00000531653 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
PSMC3-211ENST00000531653 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
PSMC3-211ENST00000531653 WDR62O43379 1518 aa22.83■■□□□ 1.25
PSMC3-211ENST00000531653 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
PSMC3-211ENST00000531653 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
PSMC3-211ENST00000531653 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
PSMC3-211ENST00000531653 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
PSMC3-211ENST00000531653 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
PSMC3-211ENST00000531653 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
PSMC3-211ENST00000531653 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
PSMC3-211ENST00000531653 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
PSMC3-211ENST00000531653 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
PSMC3-211ENST00000531653 CFTRP13569 1480 aa22.39■■□□□ 1.17
PSMC3-211ENST00000531653 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
PSMC3-211ENST00000531653 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
PSMC3-211ENST00000531653 WIZO95785 1651 aa22.36■■□□□ 1.17
PSMC3-211ENST00000531653 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
PSMC3-211ENST00000531653 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
PSMC3-211ENST00000531653 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
PSMC3-211ENST00000531653 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
PSMC3-211ENST00000531653 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
PSMC3-211ENST00000531653 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
PSMC3-211ENST00000531653 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
PSMC3-211ENST00000531653 CHD1O14646 1710 aa22.01■■□□□ 1.11
PSMC3-211ENST00000531653 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
PSMC3-211ENST00000531653 TRHP20396 242 aaPredicted RBP22.01■■□□□ 1.11
PSMC3-211ENST00000531653 TOPBP1Q92547 1522 aa22■■□□□ 1.11
PSMC3-211ENST00000531653 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
PSMC3-211ENST00000531653 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
PSMC3-211ENST00000531653 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
PSMC3-211ENST00000531653 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
PSMC3-211ENST00000531653 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.094e-7■■■□□ 16.8
PSMC3-211ENST00000531653 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
PSMC3-211ENST00000531653 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
PSMC3-211ENST00000531653 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
PSMC3-211ENST00000531653 FBLN2P98095 1184 aa21.7■■□□□ 1.06
PSMC3-211ENST00000531653 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
PSMC3-211ENST00000531653 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
PSMC3-211ENST00000531653 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
PSMC3-211ENST00000531653 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
PSMC3-211ENST00000531653 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
PSMC3-211ENST00000531653 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
PSMC3-211ENST00000531653 SOGA1O94964 1423 aa21.55■■□□□ 1.04
PSMC3-211ENST00000531653 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
PSMC3-211ENST00000531653 SYNJ2O15056 1496 aa21.52■■□□□ 1.03
PSMC3-211ENST00000531653 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
PSMC3-211ENST00000531653 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
PSMC3-211ENST00000531653 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
PSMC3-211ENST00000531653 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
PSMC3-211ENST00000531653 CUX1P39880 1505 aa21.36■■□□□ 1.01
PSMC3-211ENST00000531653 ERCC6L2Q5T890 1561 aa21.36■■□□□ 1.01
PSMC3-211ENST00000531653 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
PSMC3-211ENST00000531653 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
PSMC3-211ENST00000531653 CEP170Q5SW79 1584 aa21.26■□□□□ 0.99
PSMC3-211ENST00000531653 SHROOM2Q13796 1616 aa21.25■□□□□ 0.99
PSMC3-211ENST00000531653 NUP160Q12769 1436 aa21.23■□□□□ 0.99
PSMC3-211ENST00000531653 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
PSMC3-211ENST00000531653 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
PSMC3-211ENST00000531653 ILDR1Q86SU0 546 aaPredicted RBP21.14■□□□□ 0.97
PSMC3-211ENST00000531653 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
PSMC3-211ENST00000531653 KDM4FA0A1W2PPD8 638 aa21.1■□□□□ 0.97
PSMC3-211ENST00000531653 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
PSMC3-211ENST00000531653 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
PSMC3-211ENST00000531653 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
PSMC3-211ENST00000531653 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
PSMC3-211ENST00000531653 PRG4Q92954 1404 aaPredicted RBP20.98■□□□□ 0.95
PSMC3-211ENST00000531653 FAM69CQ0P6D2 419 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms