RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
NXF1-210ENST00000531579 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
NXF1-210ENST00000531579 ABCC9O60706 1549 aa31.38■■■□□ 2.61
NXF1-210ENST00000531579 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
NXF1-210ENST00000531579 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.43
NXF1-210ENST00000531579 NACADO15069 1562 aa30.2■■■□□ 2.42
NXF1-210ENST00000531579 MYO15BQ96JP2 1530 aa30.05■■■□□ 2.4
NXF1-210ENST00000531579 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
NXF1-210ENST00000531579 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
NXF1-210ENST00000531579 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
NXF1-210ENST00000531579 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
NXF1-210ENST00000531579 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
NXF1-210ENST00000531579 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
NXF1-210ENST00000531579 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
NXF1-210ENST00000531579 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
NXF1-210ENST00000531579 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
NXF1-210ENST00000531579 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
NXF1-210ENST00000531579 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
NXF1-210ENST00000531579 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
NXF1-210ENST00000531579 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
NXF1-210ENST00000531579 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
NXF1-210ENST00000531579 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
NXF1-210ENST00000531579 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
NXF1-210ENST00000531579 MROH2BQ7Z745 1585 aa27.76■■■□□ 2.03
NXF1-210ENST00000531579 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
NXF1-210ENST00000531579 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
NXF1-210ENST00000531579 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
NXF1-210ENST00000531579 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
NXF1-210ENST00000531579 WIZO95785 1651 aa27.42■■□□□ 1.98
NXF1-210ENST00000531579 TOP2AP11388 1531 aaKnown RBP27.17■■□□□ 1.94
NXF1-210ENST00000531579 NESP48681 1621 aa27.12■■□□□ 1.93
NXF1-210ENST00000531579 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
NXF1-210ENST00000531579 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
NXF1-210ENST00000531579 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
NXF1-210ENST00000531579 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
NXF1-210ENST00000531579 CCDC88BA6NC98 1476 aa26.9■■□□□ 1.9
NXF1-210ENST00000531579 CFTRP13569 1480 aa26.89■■□□□ 1.9
NXF1-210ENST00000531579 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
NXF1-210ENST00000531579 CUX2O14529 1486 aa26.82■■□□□ 1.88
NXF1-210ENST00000531579 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
NXF1-210ENST00000531579 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
NXF1-210ENST00000531579 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
NXF1-210ENST00000531579 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
NXF1-210ENST00000531579 MRC2Q9UBG0 1479 aa26.64■■□□□ 1.86
NXF1-210ENST00000531579 WDR62O43379 1518 aa26.53■■□□□ 1.84
NXF1-210ENST00000531579 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
NXF1-210ENST00000531579 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
NXF1-210ENST00000531579 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
NXF1-210ENST00000531579 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
NXF1-210ENST00000531579 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
NXF1-210ENST00000531579 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
NXF1-210ENST00000531579 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
NXF1-210ENST00000531579 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
NXF1-210ENST00000531579 CUX1P39880 1505 aa26.04■■□□□ 1.76
NXF1-210ENST00000531579 SOGA1O94964 1423 aa26.02■■□□□ 1.76
NXF1-210ENST00000531579 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
NXF1-210ENST00000531579 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
NXF1-210ENST00000531579 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
NXF1-210ENST00000531579 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
NXF1-210ENST00000531579 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
NXF1-210ENST00000531579 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.733e-7■■■□□ 16.9
NXF1-210ENST00000531579 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
NXF1-210ENST00000531579 OSCARQ8IYS5 282 aa25.83■■□□□ 1.73
NXF1-210ENST00000531579 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
NXF1-210ENST00000531579 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
NXF1-210ENST00000531579 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
NXF1-210ENST00000531579 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
NXF1-210ENST00000531579 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
NXF1-210ENST00000531579 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
NXF1-210ENST00000531579 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
NXF1-210ENST00000531579 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
NXF1-210ENST00000531579 FBLN2P98095 1184 aa25.64■■□□□ 1.7
NXF1-210ENST00000531579 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
NXF1-210ENST00000531579 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
NXF1-210ENST00000531579 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
NXF1-210ENST00000531579 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
NXF1-210ENST00000531579 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
NXF1-210ENST00000531579 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
NXF1-210ENST00000531579 CHD1O14646 1710 aa25.46■■□□□ 1.67
NXF1-210ENST00000531579 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
NXF1-210ENST00000531579 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
NXF1-210ENST00000531579 FHAD1B1AJZ9 1412 aa25.41■■□□□ 1.66
NXF1-210ENST00000531579 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
NXF1-210ENST00000531579 IGF1RP08069 1367 aa25.35■■□□□ 1.65
NXF1-210ENST00000531579 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
NXF1-210ENST00000531579 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
NXF1-210ENST00000531579 CLASP1Q7Z460 1538 aa25.26■■□□□ 1.63
NXF1-210ENST00000531579 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
NXF1-210ENST00000531579 NUP160Q12769 1436 aa25.22■■□□□ 1.63
NXF1-210ENST00000531579 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
NXF1-210ENST00000531579 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
NXF1-210ENST00000531579 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
NXF1-210ENST00000531579 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
NXF1-210ENST00000531579 CUL7Q14999 1698 aa25.17■■□□□ 1.62
NXF1-210ENST00000531579 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
NXF1-210ENST00000531579 CEP170Q5SW79 1584 aa25.13■■□□□ 1.61
NXF1-210ENST00000531579 RUSC2Q8N2Y8 1516 aa25.1■■□□□ 1.61
NXF1-210ENST00000531579 JPH4Q96JJ6 628 aa25.09■■□□□ 1.61
NXF1-210ENST00000531579 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
NXF1-210ENST00000531579 KIAA0586Q9BVV6 1533 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms