RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 NISCHQ9Y2I1 1504 aa30.59■■■□□ 2.49
C11orf54-210ENST00000531516 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
C11orf54-210ENST00000531516 ABCC9O60706 1549 aa27.02■■□□□ 1.92
C11orf54-210ENST00000531516 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
C11orf54-210ENST00000531516 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
C11orf54-210ENST00000531516 NACADO15069 1562 aa25.79■■□□□ 1.72
C11orf54-210ENST00000531516 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
C11orf54-210ENST00000531516 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
C11orf54-210ENST00000531516 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
C11orf54-210ENST00000531516 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.63
C11orf54-210ENST00000531516 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
C11orf54-210ENST00000531516 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
C11orf54-210ENST00000531516 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
C11orf54-210ENST00000531516 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
C11orf54-210ENST00000531516 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
C11orf54-210ENST00000531516 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
C11orf54-210ENST00000531516 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
C11orf54-210ENST00000531516 CECR2Q9BXF3 1484 aa24.34■■□□□ 1.49
C11orf54-210ENST00000531516 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
C11orf54-210ENST00000531516 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
C11orf54-210ENST00000531516 SMARCA2P51531 1590 aa23.76■■□□□ 1.39
C11orf54-210ENST00000531516 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
C11orf54-210ENST00000531516 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
C11orf54-210ENST00000531516 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
C11orf54-210ENST00000531516 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
C11orf54-210ENST00000531516 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
C11orf54-210ENST00000531516 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
C11orf54-210ENST00000531516 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
C11orf54-210ENST00000531516 NESP48681 1621 aa23.23■■□□□ 1.31
C11orf54-210ENST00000531516 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
C11orf54-210ENST00000531516 CUX2O14529 1486 aa23.22■■□□□ 1.31
C11orf54-210ENST00000531516 WIZO95785 1651 aa23.22■■□□□ 1.31
C11orf54-210ENST00000531516 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
C11orf54-210ENST00000531516 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
C11orf54-210ENST00000531516 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
C11orf54-210ENST00000531516 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
C11orf54-210ENST00000531516 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
C11orf54-210ENST00000531516 CFTRP13569 1480 aa22.89■■□□□ 1.25
C11orf54-210ENST00000531516 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
C11orf54-210ENST00000531516 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
C11orf54-210ENST00000531516 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
C11orf54-210ENST00000531516 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
C11orf54-210ENST00000531516 DNAJC5Q9H3Z4 198 aa22.84■■□□□ 1.25
C11orf54-210ENST00000531516 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
C11orf54-210ENST00000531516 WDR62O43379 1518 aa22.74■■□□□ 1.23
C11orf54-210ENST00000531516 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
C11orf54-210ENST00000531516 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
C11orf54-210ENST00000531516 PRDM2Q13029 1718 aa22.53■■□□□ 1.2
C11orf54-210ENST00000531516 ABCC8Q09428 1581 aa22.51■■□□□ 1.19
C11orf54-210ENST00000531516 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
C11orf54-210ENST00000531516 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
C11orf54-210ENST00000531516 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
C11orf54-210ENST00000531516 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
C11orf54-210ENST00000531516 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
C11orf54-210ENST00000531516 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
C11orf54-210ENST00000531516 SOGA1O94964 1423 aa22.19■■□□□ 1.14
C11orf54-210ENST00000531516 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.13
C11orf54-210ENST00000531516 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
C11orf54-210ENST00000531516 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
C11orf54-210ENST00000531516 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
C11orf54-210ENST00000531516 CUX1P39880 1505 aa22.1■■□□□ 1.13
C11orf54-210ENST00000531516 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
C11orf54-210ENST00000531516 FBLN2P98095 1184 aa22.07■■□□□ 1.12
C11orf54-210ENST00000531516 TDRD9Q8NDG6 1382 aaKnown RBP22.07■■□□□ 1.12
C11orf54-210ENST00000531516 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
C11orf54-210ENST00000531516 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
C11orf54-210ENST00000531516 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
C11orf54-210ENST00000531516 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
C11orf54-210ENST00000531516 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
C11orf54-210ENST00000531516 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
C11orf54-210ENST00000531516 MAGI1Q96QZ7 1491 aaPredicted RBP21.91■■□□□ 1.1
C11orf54-210ENST00000531516 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
C11orf54-210ENST00000531516 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
C11orf54-210ENST00000531516 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
C11orf54-210ENST00000531516 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
C11orf54-210ENST00000531516 CHD1O14646 1710 aa21.82■■□□□ 1.08
C11orf54-210ENST00000531516 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
C11orf54-210ENST00000531516 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
C11orf54-210ENST00000531516 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
C11orf54-210ENST00000531516 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.07
C11orf54-210ENST00000531516 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.07
C11orf54-210ENST00000531516 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.07
C11orf54-210ENST00000531516 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
C11orf54-210ENST00000531516 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
C11orf54-210ENST00000531516 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
C11orf54-210ENST00000531516 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
C11orf54-210ENST00000531516 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
C11orf54-210ENST00000531516 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
C11orf54-210ENST00000531516 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
C11orf54-210ENST00000531516 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
C11orf54-210ENST00000531516 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
C11orf54-210ENST00000531516 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
C11orf54-210ENST00000531516 NUP160Q12769 1436 aa21.53■■□□□ 1.04
C11orf54-210ENST00000531516 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
C11orf54-210ENST00000531516 IGF1RP08069 1367 aa21.45■■□□□ 1.02
C11orf54-210ENST00000531516 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
C11orf54-210ENST00000531516 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
C11orf54-210ENST00000531516 CUL7Q14999 1698 aa21.37■■□□□ 1.01
C11orf54-210ENST00000531516 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
C11orf54-210ENST00000531516 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms