RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 NISCHQ9Y2I1 1504 aa42.37■■■■■ 4.37
SIPA1-207ENST00000531339 ABCC9O60706 1549 aa37.89■■■■□ 3.66
SIPA1-207ENST00000531339 CCDC180Q9P1Z9 1646 aa37.24■■■■□ 3.55
SIPA1-207ENST00000531339 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
SIPA1-207ENST00000531339 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
SIPA1-207ENST00000531339 RB1CC1Q8TDY2 1594 aa35.46■■■■□ 3.27
SIPA1-207ENST00000531339 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
SIPA1-207ENST00000531339 DCAF8L2P0C7V8 631 aa35.1■■■■□ 3.21
SIPA1-207ENST00000531339 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
SIPA1-207ENST00000531339 NACADO15069 1562 aa34.93■■■■□ 3.18
SIPA1-207ENST00000531339 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
SIPA1-207ENST00000531339 UNC13AQ9UPW8 1703 aa34.83■■■■□ 3.17
SIPA1-207ENST00000531339 BICRAQ9NZM4 1560 aa34.62■■■■□ 3.13
SIPA1-207ENST00000531339 DNAJC5Q9H3Z4 198 aa34.38■■■■□ 3.09
SIPA1-207ENST00000531339 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.07
SIPA1-207ENST00000531339 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
SIPA1-207ENST00000531339 SHROOM4Q9ULL8 1493 aa34.09■■■■□ 3.05
SIPA1-207ENST00000531339 SCRIBQ14160 1630 aa34.08■■■■□ 3.05
SIPA1-207ENST00000531339 EIF4G1Q04637 1599 aaKnown RBP33.79■■■■□ 3
SIPA1-207ENST00000531339 CUX2O14529 1486 aa33.03■■■□□ 2.88
SIPA1-207ENST00000531339 BAZ1AQ9NRL2 1556 aaPredicted RBP32.78■■■□□ 2.84
SIPA1-207ENST00000531339 ERCC6Q03468 1493 aa32.7■■■□□ 2.83
SIPA1-207ENST00000531339 SMARCA4P51532 1647 aa32.68■■■□□ 2.82
SIPA1-207ENST00000531339 MROH2BQ7Z745 1585 aa32.67■■■□□ 2.82
SIPA1-207ENST00000531339 RSF1Q96T23 1441 aaPredicted RBP32.65■■■□□ 2.82
SIPA1-207ENST00000531339 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
SIPA1-207ENST00000531339 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
SIPA1-207ENST00000531339 WIZO95785 1651 aa32.37■■■□□ 2.77
SIPA1-207ENST00000531339 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.77
SIPA1-207ENST00000531339 NCAPD3P42695 1498 aa32.29■■■□□ 2.76
SIPA1-207ENST00000531339 SMARCA2P51531 1590 aa32.29■■■□□ 2.76
SIPA1-207ENST00000531339 NESP48681 1621 aa32.27■■■□□ 2.76
SIPA1-207ENST00000531339 ATAD2BQ9ULI0 1458 aa32.27■■■□□ 2.76
SIPA1-207ENST00000531339 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
SIPA1-207ENST00000531339 TOP2AP11388 1531 aaKnown RBP32.09■■■□□ 2.73
SIPA1-207ENST00000531339 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
SIPA1-207ENST00000531339 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
SIPA1-207ENST00000531339 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
SIPA1-207ENST00000531339 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
SIPA1-207ENST00000531339 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
SIPA1-207ENST00000531339 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
SIPA1-207ENST00000531339 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
SIPA1-207ENST00000531339 WDR62O43379 1518 aa31.39■■■□□ 2.62
SIPA1-207ENST00000531339 OSCARQ8IYS5 282 aa31.32■■■□□ 2.6
SIPA1-207ENST00000531339 CADPSQ9ULU8 1353 aa31.24■■■□□ 2.59
SIPA1-207ENST00000531339 CFTRP13569 1480 aa31.23■■■□□ 2.59
SIPA1-207ENST00000531339 RIMBP3CA6NJZ7 1639 aa31.15■■■□□ 2.58
SIPA1-207ENST00000531339 RIMBP3BA6NNM3 1639 aa31.15■■■□□ 2.58
SIPA1-207ENST00000531339 RIMBP3Q9UFD9 1639 aa31.15■■■□□ 2.58
SIPA1-207ENST00000531339 PRDM2Q13029 1718 aa31.06■■■□□ 2.56
SIPA1-207ENST00000531339 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
SIPA1-207ENST00000531339 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
SIPA1-207ENST00000531339 FANCD2Q9BXW9 1451 aa30.91■■■□□ 2.54
SIPA1-207ENST00000531339 ARHGEF11O15085 1522 aa30.91■■■□□ 2.54
SIPA1-207ENST00000531339 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
SIPA1-207ENST00000531339 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
SIPA1-207ENST00000531339 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
SIPA1-207ENST00000531339 CYB5RLQ6IPT4 315 aa30.73■■■□□ 2.51
SIPA1-207ENST00000531339 TRHP20396 242 aaPredicted RBP30.71■■■□□ 2.51
SIPA1-207ENST00000531339 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
SIPA1-207ENST00000531339 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
SIPA1-207ENST00000531339 AEBP2Q6ZN18 517 aaPredicted RBP30.61■■■□□ 2.49
SIPA1-207ENST00000531339 CUX1P39880 1505 aa30.6■■■□□ 2.49
SIPA1-207ENST00000531339 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
SIPA1-207ENST00000531339 BIVM-ERCC5R4GMW8 1640 aa30.57■■■□□ 2.48
SIPA1-207ENST00000531339 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
SIPA1-207ENST00000531339 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
SIPA1-207ENST00000531339 TOPBP1Q92547 1522 aa30.48■■■□□ 2.47
SIPA1-207ENST00000531339 IFT140Q96RY7 1462 aa30.43■■■□□ 2.46
SIPA1-207ENST00000531339 CHD1O14646 1710 aa30.39■■■□□ 2.45
SIPA1-207ENST00000531339 EIF4G3O43432 1585 aaKnown RBP30.36■■■□□ 2.45
SIPA1-207ENST00000531339 FGD5Q6ZNL6 1462 aa30.35■■■□□ 2.45
SIPA1-207ENST00000531339 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
SIPA1-207ENST00000531339 SOGA1O94964 1423 aa30.21■■■□□ 2.43
SIPA1-207ENST00000531339 AQRO60306 1485 aaKnown RBP eCLIP30.17■■■□□ 2.425e-7■■■■■ 36.6
SIPA1-207ENST00000531339 RAD54L2Q9Y4B4 1467 aa30.15■■■□□ 2.42
SIPA1-207ENST00000531339 FBLN2P98095 1184 aa30.13■■■□□ 2.41
SIPA1-207ENST00000531339 EEA1Q15075 1411 aa30.13■■■□□ 2.41
SIPA1-207ENST00000531339 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
SIPA1-207ENST00000531339 TARBP1Q13395 1621 aaKnown RBP30.08■■■□□ 2.41
SIPA1-207ENST00000531339 FAM9AQ8IZU1 332 aaPredicted RBP30.08■■■□□ 2.41
SIPA1-207ENST00000531339 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
SIPA1-207ENST00000531339 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
SIPA1-207ENST00000531339 WDR97A6NE52 1622 aa30.03■■■□□ 2.4
SIPA1-207ENST00000531339 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
SIPA1-207ENST00000531339 CSRNP3Q8WYN3 585 aa29.96■■■□□ 2.39
SIPA1-207ENST00000531339 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
SIPA1-207ENST00000531339 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.37
SIPA1-207ENST00000531339 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
SIPA1-207ENST00000531339 IGF1RP08069 1367 aa29.82■■■□□ 2.36
SIPA1-207ENST00000531339 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
SIPA1-207ENST00000531339 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.36
SIPA1-207ENST00000531339 GRIN2BQ13224 1484 aa29.73■■■□□ 2.35
SIPA1-207ENST00000531339 KIF21BO75037 1637 aa29.71■■■□□ 2.35
SIPA1-207ENST00000531339 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
SIPA1-207ENST00000531339 PRXQ9BXM0 1461 aa29.7■■■□□ 2.35
SIPA1-207ENST00000531339 LOC105371045A0A1W2PR82 267 aa29.69■■■□□ 2.34
SIPA1-207ENST00000531339 CARMIL1Q5VZK9 1371 aa29.68■■■□□ 2.34
SIPA1-207ENST00000531339 CHMP7Q8WUX9 453 aaPredicted RBP29.68■■■□□ 2.34
SIPA1-207ENST00000531339 CUL7Q14999 1698 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms