RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
CAPN1-221ENST00000531068 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
CAPN1-221ENST00000531068 ABCC9O60706 1549 aa23.55■■□□□ 1.36
CAPN1-221ENST00000531068 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
CAPN1-221ENST00000531068 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
CAPN1-221ENST00000531068 NACADO15069 1562 aa22.46■■□□□ 1.19
CAPN1-221ENST00000531068 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
CAPN1-221ENST00000531068 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
CAPN1-221ENST00000531068 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
CAPN1-221ENST00000531068 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
CAPN1-221ENST00000531068 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
CAPN1-221ENST00000531068 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
CAPN1-221ENST00000531068 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
CAPN1-221ENST00000531068 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
CAPN1-221ENST00000531068 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.06
CAPN1-221ENST00000531068 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
CAPN1-221ENST00000531068 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
CAPN1-221ENST00000531068 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
CAPN1-221ENST00000531068 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
CAPN1-221ENST00000531068 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
CAPN1-221ENST00000531068 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-221ENST00000531068 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
CAPN1-221ENST00000531068 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
CAPN1-221ENST00000531068 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
CAPN1-221ENST00000531068 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
CAPN1-221ENST00000531068 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
CAPN1-221ENST00000531068 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
CAPN1-221ENST00000531068 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
CAPN1-221ENST00000531068 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-221ENST00000531068 NESP48681 1621 aa20.27■□□□□ 0.84
CAPN1-221ENST00000531068 WIZO95785 1651 aa20.23■□□□□ 0.83
CAPN1-221ENST00000531068 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
CAPN1-221ENST00000531068 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
CAPN1-221ENST00000531068 CUX2O14529 1486 aa20.21■□□□□ 0.83
CAPN1-221ENST00000531068 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
CAPN1-221ENST00000531068 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
CAPN1-221ENST00000531068 CFTRP13569 1480 aa19.99■□□□□ 0.79
CAPN1-221ENST00000531068 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
CAPN1-221ENST00000531068 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
CAPN1-221ENST00000531068 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
CAPN1-221ENST00000531068 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
CAPN1-221ENST00000531068 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
CAPN1-221ENST00000531068 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
CAPN1-221ENST00000531068 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
CAPN1-221ENST00000531068 WDR62O43379 1518 aa19.8■□□□□ 0.76
CAPN1-221ENST00000531068 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
CAPN1-221ENST00000531068 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
CAPN1-221ENST00000531068 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
CAPN1-221ENST00000531068 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
CAPN1-221ENST00000531068 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
CAPN1-221ENST00000531068 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
CAPN1-221ENST00000531068 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
CAPN1-221ENST00000531068 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
CAPN1-221ENST00000531068 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-221ENST00000531068 SOGA1O94964 1423 aa19.39■□□□□ 0.69
CAPN1-221ENST00000531068 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-221ENST00000531068 AQRO60306 1485 aaKnown RBP eCLIP19.33■□□□□ 0.684e-7■■■■□ 19.3
CAPN1-221ENST00000531068 RAD54L2Q9Y4B4 1467 aa19.31■□□□□ 0.68
CAPN1-221ENST00000531068 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
CAPN1-221ENST00000531068 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
CAPN1-221ENST00000531068 CUX1P39880 1505 aa19.28■□□□□ 0.68
CAPN1-221ENST00000531068 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
CAPN1-221ENST00000531068 FBLN2P98095 1184 aa19.25■□□□□ 0.67
CAPN1-221ENST00000531068 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
CAPN1-221ENST00000531068 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
CAPN1-221ENST00000531068 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
CAPN1-221ENST00000531068 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-221ENST00000531068 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
CAPN1-221ENST00000531068 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
CAPN1-221ENST00000531068 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
CAPN1-221ENST00000531068 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
CAPN1-221ENST00000531068 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
CAPN1-221ENST00000531068 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-221ENST00000531068 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
CAPN1-221ENST00000531068 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
CAPN1-221ENST00000531068 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
CAPN1-221ENST00000531068 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
CAPN1-221ENST00000531068 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
CAPN1-221ENST00000531068 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
CAPN1-221ENST00000531068 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
CAPN1-221ENST00000531068 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
CAPN1-221ENST00000531068 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
CAPN1-221ENST00000531068 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
CAPN1-221ENST00000531068 CHD1O14646 1710 aa18.92■□□□□ 0.62
CAPN1-221ENST00000531068 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
CAPN1-221ENST00000531068 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
CAPN1-221ENST00000531068 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
CAPN1-221ENST00000531068 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
CAPN1-221ENST00000531068 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
CAPN1-221ENST00000531068 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
CAPN1-221ENST00000531068 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
CAPN1-221ENST00000531068 IGF1RP08069 1367 aa18.81■□□□□ 0.6
CAPN1-221ENST00000531068 NUP160Q12769 1436 aa18.8■□□□□ 0.6
CAPN1-221ENST00000531068 ADAMTS12P58397 1594 aa18.78■□□□□ 0.6
CAPN1-221ENST00000531068 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
CAPN1-221ENST00000531068 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-221ENST00000531068 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
CAPN1-221ENST00000531068 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
CAPN1-221ENST00000531068 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-221ENST00000531068 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms