RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
LINC01016-204ENST00000531046 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
LINC01016-204ENST00000531046 ABCC9O60706 1549 aa27.66■■■□□ 2.02
LINC01016-204ENST00000531046 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
LINC01016-204ENST00000531046 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
LINC01016-204ENST00000531046 NACADO15069 1562 aa26.41■■□□□ 1.82
LINC01016-204ENST00000531046 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
LINC01016-204ENST00000531046 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
LINC01016-204ENST00000531046 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
LINC01016-204ENST00000531046 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
LINC01016-204ENST00000531046 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
LINC01016-204ENST00000531046 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
LINC01016-204ENST00000531046 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
LINC01016-204ENST00000531046 DNAJC5BQ9UF47 199 aa25.5■■□□□ 1.67
LINC01016-204ENST00000531046 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
LINC01016-204ENST00000531046 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
LINC01016-204ENST00000531046 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
LINC01016-204ENST00000531046 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.56
LINC01016-204ENST00000531046 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
LINC01016-204ENST00000531046 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
LINC01016-204ENST00000531046 ATAD2BQ9ULI0 1458 aa24.42■■□□□ 1.5
LINC01016-204ENST00000531046 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
LINC01016-204ENST00000531046 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
LINC01016-204ENST00000531046 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
LINC01016-204ENST00000531046 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
LINC01016-204ENST00000531046 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
LINC01016-204ENST00000531046 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
LINC01016-204ENST00000531046 WIZO95785 1651 aa24.11■■□□□ 1.45
LINC01016-204ENST00000531046 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
LINC01016-204ENST00000531046 NESP48681 1621 aa23.92■■□□□ 1.42
LINC01016-204ENST00000531046 ERCC6Q03468 1493 aa23.82■■□□□ 1.4
LINC01016-204ENST00000531046 TOP2AP11388 1531 aaKnown RBP23.8■■□□□ 1.4
LINC01016-204ENST00000531046 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
LINC01016-204ENST00000531046 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.38
LINC01016-204ENST00000531046 PDS5BQ9NTI5 1447 aa23.62■■□□□ 1.37
LINC01016-204ENST00000531046 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
LINC01016-204ENST00000531046 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
LINC01016-204ENST00000531046 CUX2O14529 1486 aa23.55■■□□□ 1.36
LINC01016-204ENST00000531046 CFTRP13569 1480 aa23.53■■□□□ 1.36
LINC01016-204ENST00000531046 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
LINC01016-204ENST00000531046 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
LINC01016-204ENST00000531046 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
LINC01016-204ENST00000531046 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
LINC01016-204ENST00000531046 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.34
LINC01016-204ENST00000531046 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
LINC01016-204ENST00000531046 WDR62O43379 1518 aa23.29■■□□□ 1.32
LINC01016-204ENST00000531046 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
LINC01016-204ENST00000531046 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
LINC01016-204ENST00000531046 ABCC8Q09428 1581 aa23■■□□□ 1.27
LINC01016-204ENST00000531046 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
LINC01016-204ENST00000531046 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
LINC01016-204ENST00000531046 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
LINC01016-204ENST00000531046 CUX1P39880 1505 aa22.87■■□□□ 1.25
LINC01016-204ENST00000531046 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
LINC01016-204ENST00000531046 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
LINC01016-204ENST00000531046 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
LINC01016-204ENST00000531046 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
LINC01016-204ENST00000531046 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
LINC01016-204ENST00000531046 SOGA1O94964 1423 aa22.78■■□□□ 1.24
LINC01016-204ENST00000531046 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
LINC01016-204ENST00000531046 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
LINC01016-204ENST00000531046 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
LINC01016-204ENST00000531046 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
LINC01016-204ENST00000531046 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
LINC01016-204ENST00000531046 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
LINC01016-204ENST00000531046 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
LINC01016-204ENST00000531046 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
LINC01016-204ENST00000531046 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
LINC01016-204ENST00000531046 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
LINC01016-204ENST00000531046 FBLN2P98095 1184 aa22.53■■□□□ 1.2
LINC01016-204ENST00000531046 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
LINC01016-204ENST00000531046 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
LINC01016-204ENST00000531046 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
LINC01016-204ENST00000531046 CHD1O14646 1710 aa22.48■■□□□ 1.19
LINC01016-204ENST00000531046 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
LINC01016-204ENST00000531046 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
LINC01016-204ENST00000531046 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
LINC01016-204ENST00000531046 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
LINC01016-204ENST00000531046 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
LINC01016-204ENST00000531046 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
LINC01016-204ENST00000531046 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
LINC01016-204ENST00000531046 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
LINC01016-204ENST00000531046 RIMBP3CA6NJZ7 1639 aa22.25■■□□□ 1.15
LINC01016-204ENST00000531046 RIMBP3BA6NNM3 1639 aa22.25■■□□□ 1.15
LINC01016-204ENST00000531046 RIMBP3Q9UFD9 1639 aa22.25■■□□□ 1.15
LINC01016-204ENST00000531046 ARHGEF11O15085 1522 aa22.23■■□□□ 1.15
LINC01016-204ENST00000531046 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
LINC01016-204ENST00000531046 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
LINC01016-204ENST00000531046 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
LINC01016-204ENST00000531046 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
LINC01016-204ENST00000531046 IGF1RP08069 1367 aa22.14■■□□□ 1.14
LINC01016-204ENST00000531046 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
LINC01016-204ENST00000531046 NUP160Q12769 1436 aa22.09■■□□□ 1.13
LINC01016-204ENST00000531046 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
LINC01016-204ENST00000531046 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
LINC01016-204ENST00000531046 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
LINC01016-204ENST00000531046 CUL7Q14999 1698 aa22.04■■□□□ 1.12
LINC01016-204ENST00000531046 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
LINC01016-204ENST00000531046 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
LINC01016-204ENST00000531046 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms