RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
RDX-211ENST00000530749 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
RDX-211ENST00000530749 SHROOM4Q9ULL8 1493 aa39.38■■■■□ 3.89
RDX-211ENST00000530749 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
RDX-211ENST00000530749 DCAF8L2P0C7V8 631 aa38.83■■■■□ 3.81
RDX-211ENST00000530749 SUPT5HO00267 1087 aaKnown RBP38.3■■■■□ 3.72
RDX-211ENST00000530749 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
RDX-211ENST00000530749 ABCC9O60706 1549 aa37.52■■■■□ 3.6
RDX-211ENST00000530749 SCRIBQ14160 1630 aa37.39■■■■□ 3.58
RDX-211ENST00000530749 MYO15BQ96JP2 1530 aa37.34■■■■□ 3.57
RDX-211ENST00000530749 NACADO15069 1562 aa37.04■■■■□ 3.52
RDX-211ENST00000530749 CHIC1Q5VXU3 224 aa36.95■■■■□ 3.51
RDX-211ENST00000530749 RSF1Q96T23 1441 aaPredicted RBP36.69■■■■□ 3.46
RDX-211ENST00000530749 RB1CC1Q8TDY2 1594 aa36.57■■■■□ 3.45
RDX-211ENST00000530749 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
RDX-211ENST00000530749 MROH2BQ7Z745 1585 aa36.27■■■■□ 3.4
RDX-211ENST00000530749 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
RDX-211ENST00000530749 WIZO95785 1651 aa36.07■■■■□ 3.36
RDX-211ENST00000530749 BAZ1AQ9NRL2 1556 aaPredicted RBP35.87■■■■□ 3.33
RDX-211ENST00000530749 LOC105371045A0A1W2PR82 267 aa35.86■■■■□ 3.33
RDX-211ENST00000530749 PABPN1Q86U42 306 aaKnown RBP eCLIP35.74■■■■□ 3.31
RDX-211ENST00000530749 TRIM41Q8WV44 630 aa35.69■■■■□ 3.3
RDX-211ENST00000530749 SMARCA4P51532 1647 aa35.68■■■■□ 3.3
RDX-211ENST00000530749 BICRAQ9NZM4 1560 aa35.65■■■■□ 3.3
RDX-211ENST00000530749 TOP2AP11388 1531 aaKnown RBP35.45■■■■□ 3.27
RDX-211ENST00000530749 FAM9AQ8IZU1 332 aaPredicted RBP35.43■■■■□ 3.26
RDX-211ENST00000530749 EIF4G1Q04637 1599 aaKnown RBP35.32■■■■□ 3.24
RDX-211ENST00000530749 CCDC88BA6NC98 1476 aa35.28■■■■□ 3.24
RDX-211ENST00000530749 SMARCA2P51531 1590 aa35.26■■■■□ 3.24
RDX-211ENST00000530749 PCGF6Q9BYE7 350 aa35.2■■■■□ 3.23
RDX-211ENST00000530749 EHMT2Q96KQ7 1210 aa35.18■■■■□ 3.22
RDX-211ENST00000530749 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
RDX-211ENST00000530749 PEG3Q9GZU2 1588 aa34.99■■■■□ 3.19
RDX-211ENST00000530749 ATAD2BQ9ULI0 1458 aa34.87■■■■□ 3.17
RDX-211ENST00000530749 HRCP23327 699 aa34.75■■■■□ 3.15
RDX-211ENST00000530749 BAZ1BQ9UIG0 1483 aaKnown RBP34.75■■■■□ 3.15
RDX-211ENST00000530749 TRIM26Q12899 539 aaPredicted RBP34.62■■■■□ 3.13
RDX-211ENST00000530749 SOGA1O94964 1423 aa34.58■■■■□ 3.13
RDX-211ENST00000530749 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
RDX-211ENST00000530749 RUSC2Q8N2Y8 1516 aa34.47■■■■□ 3.11
RDX-211ENST00000530749 SYNJ1O43426 1573 aa34.38■■■■□ 3.09
RDX-211ENST00000530749 PPARGC1BQ86YN6 1023 aaKnown RBP34.3■■■■□ 3.08
RDX-211ENST00000530749 NCAPD3P42695 1498 aa34.27■■■■□ 3.08
RDX-211ENST00000530749 CSRNP3Q8WYN3 585 aa34.26■■■■□ 3.08
RDX-211ENST00000530749 HMGXB3Q12766 1538 aa34.24■■■■□ 3.07
RDX-211ENST00000530749 EEA1Q15075 1411 aa34.21■■■■□ 3.07
RDX-211ENST00000530749 CEP162Q5TB80 1403 aa34.11■■■■□ 3.05
RDX-211ENST00000530749 UBTFP17480 764 aaKnown RBP34.09■■■■□ 3.05
RDX-211ENST00000530749 TNIKQ9UKE5 1360 aa34.06■■■■□ 3.04
RDX-211ENST00000530749 GOLGA3Q08378 1498 aa34■■■■□ 3.03
RDX-211ENST00000530749 TOP2BQ02880 1626 aa33.98■■■■□ 3.03
RDX-211ENST00000530749 TTBK1Q5TCY1 1321 aaPredicted RBP33.88■■■■□ 3.01
RDX-211ENST00000530749 BIVM-ERCC5R4GMW8 1640 aa33.88■■■■□ 3.01
RDX-211ENST00000530749 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
RDX-211ENST00000530749 CFTRP13569 1480 aa33.85■■■■□ 3.01
RDX-211ENST00000530749 KIF21BO75037 1637 aa33.84■■■■□ 3.01
RDX-211ENST00000530749 CUX1P39880 1505 aa33.8■■■■□ 3
RDX-211ENST00000530749 CC2D2AQ9P2K1 1620 aa33.79■■■■□ 3
RDX-211ENST00000530749 RAPGEF2Q9Y4G8 1499 aa33.76■■■■□ 3
RDX-211ENST00000530749 RANGAP1P46060 587 aaPredicted RBP33.63■■■□□ 2.97
RDX-211ENST00000530749 PRDM2Q13029 1718 aa33.6■■■□□ 2.97
RDX-211ENST00000530749 CLIP1P30622 1438 aa33.6■■■□□ 2.97
RDX-211ENST00000530749 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
RDX-211ENST00000530749 ZEB1P37275 1124 aaPredicted RBP33.51■■■□□ 2.96
RDX-211ENST00000530749 PRXQ9BXM0 1461 aa33.47■■■□□ 2.95
RDX-211ENST00000530749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.44■■■□□ 2.94
RDX-211ENST00000530749 KIF27Q86VH2 1401 aa33.44■■■□□ 2.94
RDX-211ENST00000530749 ERICH3Q5RHP9 1530 aa33.39■■■□□ 2.94
RDX-211ENST00000530749 VPS8Q8N3P4 1428 aa33.37■■■□□ 2.93
RDX-211ENST00000530749 NESP48681 1621 aa33.28■■■□□ 2.92
RDX-211ENST00000530749 CUX2O14529 1486 aa33.28■■■□□ 2.92
RDX-211ENST00000530749 FGD5Q6ZNL6 1462 aa33.28■■■□□ 2.92
RDX-211ENST00000530749 FANCD2Q9BXW9 1451 aa33.28■■■□□ 2.92
RDX-211ENST00000530749 CCER1Q8TC90 406 aaPredicted RBP33.26■■■□□ 2.91
RDX-211ENST00000530749 ARAP1Q96P48 1450 aa33.16■■■□□ 2.9
RDX-211ENST00000530749 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
RDX-211ENST00000530749 IGF1RP08069 1367 aa33.15■■■□□ 2.9
RDX-211ENST00000530749 APLP2Q06481 763 aa33.14■■■□□ 2.9
RDX-211ENST00000530749 RAD54L2Q9Y4B4 1467 aa33.03■■■□□ 2.88
RDX-211ENST00000530749 DNMBPQ6XZF7 1577 aa33.02■■■□□ 2.88
RDX-211ENST00000530749 TOPBP1Q92547 1522 aa33.01■■■□□ 2.87
RDX-211ENST00000530749 HNRNPUL2Q1KMD3 747 aaKnown RBP33.01■■■□□ 2.87
RDX-211ENST00000530749 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
RDX-211ENST00000530749 ARHGAP35Q9NRY4 1499 aa32.97■■■□□ 2.87
RDX-211ENST00000530749 POLA1P09884 1462 aaPredicted RBP32.97■■■□□ 2.87
RDX-211ENST00000530749 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
RDX-211ENST00000530749 KANK4Q5T7N3 995 aaPredicted RBP32.9■■■□□ 2.86
RDX-211ENST00000530749 URB2Q14146 1524 aaKnown RBP32.86■■■□□ 2.85
RDX-211ENST00000530749 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
RDX-211ENST00000530749 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
RDX-211ENST00000530749 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.82
RDX-211ENST00000530749 P3H3Q8IVL6 736 aa32.67■■■□□ 2.82
RDX-211ENST00000530749 WDR97A6NE52 1622 aa32.65■■■□□ 2.82
RDX-211ENST00000530749 TDRD9Q8NDG6 1382 aaKnown RBP32.65■■■□□ 2.82
RDX-211ENST00000530749 CUL7Q14999 1698 aa32.58■■■□□ 2.81
RDX-211ENST00000530749 ABCA5Q8WWZ7 1642 aa32.53■■■□□ 2.8
RDX-211ENST00000530749 FHOD3Q2V2M9 1422 aa32.5■■■□□ 2.79
RDX-211ENST00000530749 TIAM1Q13009 1591 aa32.5■■■□□ 2.79
RDX-211ENST00000530749 RRBP1Q9P2E9 1410 aaKnown RBP32.49■■■□□ 2.79
RDX-211ENST00000530749 GAPVD1Q14C86 1478 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms