RNA–Protein interactions for RNA: ENST00000530390.5

PPFIA1-214, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-214ENST00000530390 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
PPFIA1-214ENST00000530390 CCDC180Q9P1Z9 1646 aa24.22■■□□□ 1.47
PPFIA1-214ENST00000530390 ABCC9O60706 1549 aa23.32■■□□□ 1.32
PPFIA1-214ENST00000530390 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
PPFIA1-214ENST00000530390 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
PPFIA1-214ENST00000530390 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
PPFIA1-214ENST00000530390 NACADO15069 1562 aa22.66■■□□□ 1.22
PPFIA1-214ENST00000530390 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
PPFIA1-214ENST00000530390 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
PPFIA1-214ENST00000530390 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
PPFIA1-214ENST00000530390 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
PPFIA1-214ENST00000530390 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
PPFIA1-214ENST00000530390 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
PPFIA1-214ENST00000530390 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.09
PPFIA1-214ENST00000530390 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
PPFIA1-214ENST00000530390 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
PPFIA1-214ENST00000530390 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
PPFIA1-214ENST00000530390 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
PPFIA1-214ENST00000530390 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.98
PPFIA1-214ENST00000530390 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
PPFIA1-214ENST00000530390 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
PPFIA1-214ENST00000530390 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
PPFIA1-214ENST00000530390 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
PPFIA1-214ENST00000530390 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
PPFIA1-214ENST00000530390 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
PPFIA1-214ENST00000530390 WIZO95785 1651 aa20.96■□□□□ 0.95
PPFIA1-214ENST00000530390 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
PPFIA1-214ENST00000530390 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
PPFIA1-214ENST00000530390 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
PPFIA1-214ENST00000530390 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
PPFIA1-214ENST00000530390 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
PPFIA1-214ENST00000530390 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
PPFIA1-214ENST00000530390 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
PPFIA1-214ENST00000530390 CADPSQ9ULU8 1353 aa20.31■□□□□ 0.84
PPFIA1-214ENST00000530390 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
PPFIA1-214ENST00000530390 NESP48681 1621 aa20.29■□□□□ 0.84
PPFIA1-214ENST00000530390 CFTRP13569 1480 aa20.27■□□□□ 0.84
PPFIA1-214ENST00000530390 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
PPFIA1-214ENST00000530390 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
PPFIA1-214ENST00000530390 FANCD2Q9BXW9 1451 aa20.1■□□□□ 0.81
PPFIA1-214ENST00000530390 ERCC6Q03468 1493 aa20.08■□□□□ 0.81
PPFIA1-214ENST00000530390 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
PPFIA1-214ENST00000530390 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
PPFIA1-214ENST00000530390 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
PPFIA1-214ENST00000530390 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
PPFIA1-214ENST00000530390 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
PPFIA1-214ENST00000530390 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
PPFIA1-214ENST00000530390 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
PPFIA1-214ENST00000530390 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
PPFIA1-214ENST00000530390 WDR62O43379 1518 aa19.83■□□□□ 0.77
PPFIA1-214ENST00000530390 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
PPFIA1-214ENST00000530390 CUX1P39880 1505 aa19.81■□□□□ 0.76
PPFIA1-214ENST00000530390 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
PPFIA1-214ENST00000530390 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
PPFIA1-214ENST00000530390 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
PPFIA1-214ENST00000530390 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
PPFIA1-214ENST00000530390 CUX2O14529 1486 aa19.69■□□□□ 0.74
PPFIA1-214ENST00000530390 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
PPFIA1-214ENST00000530390 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
PPFIA1-214ENST00000530390 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
PPFIA1-214ENST00000530390 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
PPFIA1-214ENST00000530390 SOGA1O94964 1423 aa19.59■□□□□ 0.73
PPFIA1-214ENST00000530390 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
PPFIA1-214ENST00000530390 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
PPFIA1-214ENST00000530390 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
PPFIA1-214ENST00000530390 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
PPFIA1-214ENST00000530390 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
PPFIA1-214ENST00000530390 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
PPFIA1-214ENST00000530390 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
PPFIA1-214ENST00000530390 ABCA5Q8WWZ7 1642 aa19.41■□□□□ 0.7
PPFIA1-214ENST00000530390 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.73e-6■■■■■ 30
PPFIA1-214ENST00000530390 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
PPFIA1-214ENST00000530390 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
PPFIA1-214ENST00000530390 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
PPFIA1-214ENST00000530390 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
PPFIA1-214ENST00000530390 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
PPFIA1-214ENST00000530390 EEA1Q15075 1411 aa19.31■□□□□ 0.68
PPFIA1-214ENST00000530390 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
PPFIA1-214ENST00000530390 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
PPFIA1-214ENST00000530390 SNAPC4Q5SXM2 1469 aa19.26■□□□□ 0.67
PPFIA1-214ENST00000530390 MAGI1Q96QZ7 1491 aaPredicted RBP19.23■□□□□ 0.67
PPFIA1-214ENST00000530390 IGF1RP08069 1367 aa19.23■□□□□ 0.67
PPFIA1-214ENST00000530390 CUL7Q14999 1698 aa19.21■□□□□ 0.67
PPFIA1-214ENST00000530390 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
PPFIA1-214ENST00000530390 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
PPFIA1-214ENST00000530390 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
PPFIA1-214ENST00000530390 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
PPFIA1-214ENST00000530390 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
PPFIA1-214ENST00000530390 FBLN2P98095 1184 aa19.12■□□□□ 0.65
PPFIA1-214ENST00000530390 CHD1O14646 1710 aa19.11■□□□□ 0.65
PPFIA1-214ENST00000530390 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
PPFIA1-214ENST00000530390 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
PPFIA1-214ENST00000530390 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
PPFIA1-214ENST00000530390 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
PPFIA1-214ENST00000530390 KIF21BO75037 1637 aa19.08■□□□□ 0.65
PPFIA1-214ENST00000530390 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
PPFIA1-214ENST00000530390 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
PPFIA1-214ENST00000530390 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
PPFIA1-214ENST00000530390 NUP160Q12769 1436 aa18.97■□□□□ 0.63
PPFIA1-214ENST00000530390 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms