RNA–Protein interactions for RNA: ENST00000530305.1

RPS6KA1-217, Transcript of ribosomal protein S6 kinase A1, humanhuman

TSL 4

Gene RPS6KA1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KA1-217ENST00000530305 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
RPS6KA1-217ENST00000530305 ABCC9O60706 1549 aa26.63■■□□□ 1.85
RPS6KA1-217ENST00000530305 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
RPS6KA1-217ENST00000530305 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
RPS6KA1-217ENST00000530305 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
RPS6KA1-217ENST00000530305 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
RPS6KA1-217ENST00000530305 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
RPS6KA1-217ENST00000530305 NACADO15069 1562 aa24.47■■□□□ 1.51
RPS6KA1-217ENST00000530305 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
RPS6KA1-217ENST00000530305 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
RPS6KA1-217ENST00000530305 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
RPS6KA1-217ENST00000530305 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
RPS6KA1-217ENST00000530305 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
RPS6KA1-217ENST00000530305 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
RPS6KA1-217ENST00000530305 EIF4G1Q04637 1599 aaKnown RBP23.68■■□□□ 1.38
RPS6KA1-217ENST00000530305 SHROOM4Q9ULL8 1493 aa23.59■■□□□ 1.37
RPS6KA1-217ENST00000530305 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
RPS6KA1-217ENST00000530305 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.34
RPS6KA1-217ENST00000530305 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
RPS6KA1-217ENST00000530305 CUX2O14529 1486 aa23.05■■□□□ 1.28
RPS6KA1-217ENST00000530305 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
RPS6KA1-217ENST00000530305 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
RPS6KA1-217ENST00000530305 NESP48681 1621 aa22.72■■□□□ 1.23
RPS6KA1-217ENST00000530305 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
RPS6KA1-217ENST00000530305 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
RPS6KA1-217ENST00000530305 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
RPS6KA1-217ENST00000530305 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
RPS6KA1-217ENST00000530305 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
RPS6KA1-217ENST00000530305 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
RPS6KA1-217ENST00000530305 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
RPS6KA1-217ENST00000530305 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
RPS6KA1-217ENST00000530305 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
RPS6KA1-217ENST00000530305 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
RPS6KA1-217ENST00000530305 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
RPS6KA1-217ENST00000530305 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
RPS6KA1-217ENST00000530305 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
RPS6KA1-217ENST00000530305 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
RPS6KA1-217ENST00000530305 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
RPS6KA1-217ENST00000530305 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
RPS6KA1-217ENST00000530305 WDR62O43379 1518 aa21.98■■□□□ 1.11
RPS6KA1-217ENST00000530305 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
RPS6KA1-217ENST00000530305 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
RPS6KA1-217ENST00000530305 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
RPS6KA1-217ENST00000530305 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
RPS6KA1-217ENST00000530305 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
RPS6KA1-217ENST00000530305 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
RPS6KA1-217ENST00000530305 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
RPS6KA1-217ENST00000530305 WIZO95785 1651 aa21.65■■□□□ 1.06
RPS6KA1-217ENST00000530305 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
RPS6KA1-217ENST00000530305 CFTRP13569 1480 aa21.59■■□□□ 1.05
RPS6KA1-217ENST00000530305 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
RPS6KA1-217ENST00000530305 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
RPS6KA1-217ENST00000530305 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
RPS6KA1-217ENST00000530305 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
RPS6KA1-217ENST00000530305 IFT140Q96RY7 1462 aa21.37■■□□□ 1.01
RPS6KA1-217ENST00000530305 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
RPS6KA1-217ENST00000530305 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
RPS6KA1-217ENST00000530305 FBLN2P98095 1184 aa21.28■■□□□ 1
RPS6KA1-217ENST00000530305 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
RPS6KA1-217ENST00000530305 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
RPS6KA1-217ENST00000530305 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
RPS6KA1-217ENST00000530305 CHD1O14646 1710 aa21.21■□□□□ 0.99
RPS6KA1-217ENST00000530305 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
RPS6KA1-217ENST00000530305 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
RPS6KA1-217ENST00000530305 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
RPS6KA1-217ENST00000530305 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
RPS6KA1-217ENST00000530305 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
RPS6KA1-217ENST00000530305 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
RPS6KA1-217ENST00000530305 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
RPS6KA1-217ENST00000530305 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
RPS6KA1-217ENST00000530305 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
RPS6KA1-217ENST00000530305 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
RPS6KA1-217ENST00000530305 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
RPS6KA1-217ENST00000530305 SOGA1O94964 1423 aa20.92■□□□□ 0.94
RPS6KA1-217ENST00000530305 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
RPS6KA1-217ENST00000530305 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
RPS6KA1-217ENST00000530305 ERCC6L2Q5T890 1561 aa20.77■□□□□ 0.92
RPS6KA1-217ENST00000530305 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
RPS6KA1-217ENST00000530305 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
RPS6KA1-217ENST00000530305 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
RPS6KA1-217ENST00000530305 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
RPS6KA1-217ENST00000530305 ILDR1Q86SU0 546 aaPredicted RBP20.71■□□□□ 0.91
RPS6KA1-217ENST00000530305 CUX1P39880 1505 aa20.68■□□□□ 0.9
RPS6KA1-217ENST00000530305 KDM4FA0A1W2PPD8 638 aa20.63■□□□□ 0.89
RPS6KA1-217ENST00000530305 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
RPS6KA1-217ENST00000530305 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
RPS6KA1-217ENST00000530305 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
RPS6KA1-217ENST00000530305 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
RPS6KA1-217ENST00000530305 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
RPS6KA1-217ENST00000530305 FAM69CQ0P6D2 419 aa20.49■□□□□ 0.87
RPS6KA1-217ENST00000530305 NUP160Q12769 1436 aa20.47■□□□□ 0.87
RPS6KA1-217ENST00000530305 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.87
RPS6KA1-217ENST00000530305 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
RPS6KA1-217ENST00000530305 SHROOM2Q13796 1616 aa20.39■□□□□ 0.86
RPS6KA1-217ENST00000530305 ABCC10Q5T3U5 1492 aa20.38■□□□□ 0.85
RPS6KA1-217ENST00000530305 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
RPS6KA1-217ENST00000530305 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
RPS6KA1-217ENST00000530305 JPH4Q96JJ6 628 aa20.34■□□□□ 0.85
RPS6KA1-217ENST00000530305 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
RPS6KA1-217ENST00000530305 DIP2BQ9P265 1576 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms